Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p16530 Brassica napus
Aa31LG3G7350 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.919 Anthoceros agrestis
Actinidia08894 Actinidia chinensis
Actinidia36830 Actinidia chinensis
Ah.11g046520 Amaranthus hybridus
AL8G25050 Arabidopsis lyrata
Aqoxy3G01724 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.Q7T1PG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z2A8SP Arachis hypogaea
AT5G50870 Arabidopsis thaliana
ATR0582G280 Amborella trichopoda
Atru.chr6.1890 Acer truncatum
AUR62029535 Chenopodium quinoa
AUR62034792 Chenopodium quinoa
BcaC01g06058 Brassica carinata
BolC3t14327H Brassica oleracea
BraA03t10940Z Brassica rapa
C03p19460 Brassica napus
CAN.G65.109 Capsicum annuum
CANSAT80G2273 Cannabis sativa
CARHR257380 Cardamine hirsuta
Carub.0008s1086 Capsella rubella
Ca_16073_v3 Cicer arietinum L.
Cc04_g09520 Coffea canephora
CDE02G3954 Ceratophyllum demersum
CDE09G0996 Ceratophyllum demersum
CDE09G1230 Ceratophyllum demersum
Cfa024518 Carpinus fangiana
Ciclev10032815m.g Citrus clementina
CiPaw.11G002500 Carya illinoinensis
CiPaw.12G001900 Carya illinoinensis
ClCG06G018200 Citrullus lanatus
ClCG07G005660 Citrullus lanatus
COL.COLO4_16678 Corchorus olitorius
Cpa.g.sc4.125 Carica papaya
Cre01.g046850 Chlamydomonas reinhardtii
CsaV3_1G000230 Cucumis sativus L.
CSS0005745 Camellia sinensis var. sinensis
CSS0008706 Camellia sinensis var. sinensis
CSS0015538 Camellia sinensis var. sinensis
CSS0018434 Camellia sinensis var. sinensis
CSS0022322 Camellia sinensis var. sinensis
CSS0046810 Camellia sinensis var. sinensis
DCAR_016360 Daucus carota
Dinv11213 Davidia involucrata
Dinv23194 Davidia involucrata
Duzib068G1461 Durio zibethinus
Duzib084G0345 Durio zibethinus
Duzib205G0344 Durio zibethinus
ECA232G2135 Erigeron canadensis
ECA246G4432 Erigeron canadensis
EL10Ac5g11339 Beta vulgaris
Eucgr.K02668 Eucalyptus grandis
FAN04G2695 Fragaria x ananassa
FAN08G2874 Fragaria x ananassa
FAN13G1099 Fragaria x ananassa
FAN18G0611 Fragaria x ananassa
FvH4_5g09050 Fragaria vesca
Glyma.04G199200 Glycine max
Glyma.06G166300 Glycine max
Gohir.A11G037700 Gossypium hirsutum
Gohir.A12G192700 Gossypium hirsutum
Gohir.D11G040950 Gossypium hirsutum
Gohir.D12G194800 Gossypium hirsutum
Gorai.007G044100 Gossypium raimondii
Gorai.008G209500 Gossypium raimondii
GSVIVG01008615001 Vitis vinifera
HanXRQChr06g0175201 Helianthus annuus
HanXRQChr09g0273641 Helianthus annuus
HanXRQChr16g0498781 Helianthus annuus
Haze_07125 Corylus avellana
Haze_26106 Corylus avellana
Hma1.2p1_1524F.1_g288830 Hydrangea macrophylla
HPP92_003184 Vanilla planifolia
HPP92_025291 Vanilla planifolia
Hund02480 Selenicereus undatus
Lalb_Chr11g0069331 Lupinus albus
Lalb_Chr23g0272971 Lupinus albus
Lj1g0020356 Lotus japonicus
Lj5A91T48 Lonicera japonica
Lj9A483T63 Lonicera japonica
Lsat_1_v5_gn_3_31580 Lactuca sativa
Lsat_1_v5_gn_4_83541 Lactuca sativa
Manes.06G124300 Manihot esculenta
Manes.14G047100 Manihot esculenta
Mapoly0127s0049 Marchantia polymorpha
MBI11_g34371_MAGBIO Magnolia biondii
MCO05G358 Micromonas commoda
MD06G1134200 Malus domestica
MD14G1150500 Malus domestica
Medtr3g098780 Medicago truncatula
MELO3C026177.2 Cucumis melo
Migut.O00353 Erythranthe guttata
MSTRG.4623 Avicennia marina
Nitab4.5_0000033g0120 Nicotiana tabacum
Nitab4.5_0006857g0010 Nicotiana tabacum
Nn3g16340 Nelumbo nucifera
Oeu043134.1 Olea europaea
Oeu058110.1 Olea europaea
Os01g0925800 Oryza sativa ssp. japonica
Peaxi162Scf01064g00237 Petunia axillaris
PGR044G0139 Punica granatum
PGSC0003DMG400027041 Solanum tuberosum
Phvul.009G163400 Phaseolus vulgaris
Potri.012G104100 Populus trichocarpa
Potri.015G103400 Populus trichocarpa
Pp3c24_12210 Physcomitrium patens
PRCOL_00005472 Prasinoderma coloniale
Prupe.4G150600 Prunus persica
Prupe.5G145200 Prunus persica
Psat5g053600 Pisum sativum
PSO017G1401 Papaver somniferum
PSO478G4241 Papaver somniferum
QL10p001120 Quercus lobata
RcHm_v2.0_Chr7g0189161 Rosa chinensis
Rhsim12G0178500 Rhododendron simsii
Sabra15G0122700 Salix brachista
SalBow1G8711 Salvia bowleyana
Sc10g0010690 Simmondsia chinensis
Sc10g0010780 Simmondsia chinensis
Sed0004769 Sechium edule
SEGI_04180 Sequoiadendron giganteum
SEGI_30300 Sequoiadendron giganteum
SGA_v2.0_scaffold74G24710 Striga asiatica
SMO111G0206 Selaginella moellendorffii
Solyc06g072570.4 Solanum lycopersicum
Sopen06g028920 Solanum pennellii
Sp6g13010 Schrenkiella parvula
TAR622G0592 Trochodendron aralioides
THA.LOC104825033 Tarenaya hassleriana
Thecc.03G136900 Theobroma cacao
Thhalv10014747m.g Eutrema salsugineum
TPR.G21583 Trifolium pratense
TWI14G0127 Tripterygium wilfordii
TWI38G2382 Tripterygium wilfordii
unitig_22.g5343 Utricularia gibba
vmacro16743 Vaccinium macrocarpon
VMungo1309G1070 Vigna mungo
Zm00001eb363890 Zea mays

User provided reference genes

Program Settings