Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p20280 Brassica napus
Aa31LG9G1130 Aethionema arabicum
Actinidia30715 Actinidia chinensis
Actinidia36871 Actinidia chinensis
Ah.03g137060 Amaranthus hybridus
AL7G49340 Arabidopsis lyrata
Aqoxy5G03770 Aquilegia oxysepala
Aqoxy5G03772 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8578L4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WBLX3G Arachis hypogaea
AT5G40480 Arabidopsis thaliana
ATR0824G203 Amborella trichopoda
Atru.chr6.2399 Acer truncatum
Atru.chr6.2400 Acer truncatum
AUR62028465 Chenopodium quinoa
AUR62043498 Chenopodium quinoa
BcaB02g07947 Brassica carinata
BcaC08g44458 Brassica carinata
BolC6t37108H Brassica oleracea
BraA07t29729Z Brassica rapa
C06p19070 Brassica napus
CAN.G257.2 Capsicum annuum
CANSAT64G0570 Cannabis sativa
CARHR149540 Cardamine hirsuta
CARHR261510 Cardamine hirsuta
Carub.0007s0778 Capsella rubella
Carub.0007s3510 Capsella rubella
Ca_04160_v3 Cicer arietinum L.
Ca_06838_v3 Cicer arietinum L.
CBR_g4853 Chara braunii
CBR_g4854 Chara braunii
Cc07_g01650 Coffea canephora
CDE07G0232 Ceratophyllum demersum
CDE07G0302 Ceratophyllum demersum
CDE07G1094 Ceratophyllum demersum
CDE07G2050 Ceratophyllum demersum
Cfa007367 Carpinus fangiana
Ciclev10014326m.g Citrus clementina
Ciclev10018026m.g Citrus clementina
CiPaw.03G043900 Carya illinoinensis
ClCG10G013870 Citrullus lanatus
ClCG10G013880 Citrullus lanatus
COL.COLO4_29124 Corchorus olitorius
Cpa.g.c33664.1 Carica papaya
Cpa.g.sc108.68 Carica papaya
Cpa.g.sc108.69 Carica papaya
CsaV3_3G042810 Cucumis sativus L.
CSS0016229 Camellia sinensis var. sinensis
CSS0027009 Camellia sinensis var. sinensis
DCAR_001439 Daucus carota
DCAR_003836 Daucus carota
Dinv35107 Davidia involucrata
Duzib147G0997 Durio zibethinus
EL10Ac6g14083 Beta vulgaris
Eucgr.J02245 Eucalyptus grandis
FAN02G1996 Fragaria x ananassa
FAN09G2859 Fragaria x ananassa
FAN11G1562 Fragaria x ananassa
FAN14G4225 Fragaria x ananassa
FvH4_1g22462 Fragaria vesca
FvH4_3g31750 Fragaria vesca
FvH4_4g00580 Fragaria vesca
FvH4_6g51430 Fragaria vesca
Glyma.05G003500 Glycine max
Glyma.15G246500 Glycine max
Gohir.A09G029300 Gossypium hirsutum
Gohir.D09G029000 Gossypium hirsutum
Gohir.D09G029066 Gossypium hirsutum
Gorai.006G033800 Gossypium raimondii
Gorai.006G033900 Gossypium raimondii
GSVIVG01032403001 Vitis vinifera
Haze_14742 Corylus avellana
Hma1.2p1_0999F.1_g246170 Hydrangea macrophylla
HPP92_013426 Vanilla planifolia
Hund10088 Selenicereus undatus
Lalb_Chr06g0175731 Lupinus albus
Lj2g0007459 Lotus japonicus
Lju41A42T102 Lonicera japonica
Manes.17G112100 Manihot esculenta
Mapoly0043s0050 Marchantia polymorpha
MBI06_g10159_MAGBIO Magnolia biondii
MD17G1026700 Malus domestica
Medtr6g004840 Medicago truncatula
MELO3C026582.2 Cucumis melo
Migut.H00075 Erythranthe guttata
Migut.J01521 Erythranthe guttata
Migut.J01523 Erythranthe guttata
MSTRG.3144 Avicennia marina
Nitab4.5_0001040g0180 Nicotiana tabacum
Nitab4.5_0001655g0190 Nicotiana tabacum
Nn4g22627 Nelumbo nucifera
Oeu046826.1 Olea europaea
Os09g0565450 Oryza sativa ssp. japonica
Os09g0565500 Oryza sativa ssp. japonica
Peaxi162Scf00796g00213 Petunia axillaris
PGR083G0595 Punica granatum
PGR083G1349 Punica granatum
PGSC0003DMG400008314 Solanum tuberosum
Phvul.004G006800 Phaseolus vulgaris
Potri.001G345100 Populus trichocarpa
Pp3c27_1470 Physcomitrium patens
Prupe.3G292000 Prunus persica
Psat0s4196g0080 Pisum sativum
Psat1g054400 Pisum sativum
Psat2g063360 Pisum sativum
Psat5g189920 Pisum sativum
PSO063G6295 Papaver somniferum
PSO067G0032 Papaver somniferum
RcHm_v2.0_Chr2g0173101 Rosa chinensis
RcHm_v2.0_Chr5g0056391 Rosa chinensis
Rhsim10G0015700 Rhododendron simsii
Rhsim10G0016800 Rhododendron simsii
Sabra16G0224100 Salix brachista
SalBow1G1005 Salvia bowleyana
Sc03g0007420 Simmondsia chinensis
Sed0022939 Sechium edule
SEGI_19244 Sequoiadendron giganteum
SEGI_28921 Sequoiadendron giganteum
SEGI_35499 Sequoiadendron giganteum
SGA_v2.0_scaffold18G08276 Striga asiatica
SMO145G0002 Selaginella moellendorffii
Solyc02g070810.4 Solanum lycopersicum
Sopen02g019920 Solanum pennellii
Sp7g01430 Schrenkiella parvula
TAR629G0020 Trochodendron aralioides
THA.LOC104805370 Tarenaya hassleriana
Thecc.04G017500 Theobroma cacao
Thhalv10027618m.g Eutrema salsugineum
TPR.G33247 Trifolium pratense
TWI56G0249 Tripterygium wilfordii
unitig_748.g6983 Utricularia gibba
unitig_748.g6984 Utricularia gibba
vmacro05867 Vaccinium macrocarpon
VMungo0464G1605 Vigna mungo
VMungo1383G2035 Vigna mungo
Zm00001eb027130 Zea mays
Zm00001eb096130 Zea mays
Zm00001eb119700 Zea mays
Zm00001eb150600 Zea mays
Zm00001eb387740 Zea mays

User provided reference genes

Program Settings