Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p00340 Brassica napus
Aa31LG1G28930 Aethionema arabicum
Aa31LG1G8870 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4336 Anthoceros agrestis
Actinidia01488 Actinidia chinensis
Actinidia24359 Actinidia chinensis
Actinidia24819 Actinidia chinensis
Actinidia26721 Actinidia chinensis
Ah.08g213410 Amaranthus hybridus
Ah.15g093170 Amaranthus hybridus
AL4G47170 Arabidopsis lyrata
Aqoxy2G02935 Aquilegia oxysepala
Aqoxy5G00759 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1X1TH0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5E2DVT Arachis hypogaea
AT2G47590 Arabidopsis thaliana
ATR0787G164 Amborella trichopoda
Atru.chr5.1141 Acer truncatum
AUR62008668 Chenopodium quinoa
AUR62025576 Chenopodium quinoa
BcaB02g08760 Brassica carinata
BolC4t21669H Brassica oleracea
BraA05t19032Z Brassica rapa
C04p00260 Brassica napus
CAN.G472.9 Capsicum annuum
CANSAT25G3636 Cannabis sativa
CARHR142990 Cardamine hirsuta
Carub.0004s3032 Capsella rubella
Ca_10330_v3 Cicer arietinum L.
CBR_g37632 Chara braunii
Cc00_g06400 Coffea canephora
Cc01_g20890 Coffea canephora
CDE01G0802 Ceratophyllum demersum
CDE12G0252 Ceratophyllum demersum
Cfa005907 Carpinus fangiana
Ciclev10020039m.g Citrus clementina
CiPaw.07G109500 Carya illinoinensis
CiPaw.07G109700 Carya illinoinensis
CiPaw.08G094800 Carya illinoinensis
ClCG09G005840 Citrullus lanatus
COL.COLO4_23340 Corchorus olitorius
Cpa.g.sc9.257 Carica papaya
Cre12.g534550 Chlamydomonas reinhardtii
CsaV3_7G029300 Cucumis sativus L.
CSS0004249 Camellia sinensis var. sinensis
CSS0020775 Camellia sinensis var. sinensis
CSS0044226 Camellia sinensis var. sinensis
DCAR_002839 Daucus carota
Dinv06433 Davidia involucrata
Dinv19685 Davidia involucrata
Dinv33056 Davidia involucrata
Duzib133G0301 Durio zibethinus
Duzib138G0333 Durio zibethinus
ECA247G0418 Erigeron canadensis
ECA248G2553 Erigeron canadensis
EL10Ac7g17512 Beta vulgaris
Eucgr.H01108 Eucalyptus grandis
FAN15G0942 Fragaria x ananassa
FAN24G2572 Fragaria x ananassa
FAN27G3418 Fragaria x ananassa
FvH4_2g25790 Fragaria vesca
Glyma.02G017500 Glycine max
Glyma.10G017900 Glycine max
Gohir.A11G114200 Gossypium hirsutum
Gohir.D11G119300 Gossypium hirsutum
Gorai.007G127800 Gossypium raimondii
GSVIVG01028024001 Vitis vinifera
HanXRQChr03g0075551 Helianthus annuus
HanXRQChr10g0285021 Helianthus annuus
HanXRQChr15g0465641 Helianthus annuus
Haze_04943 Corylus avellana
Hma1.2p1_0134F.1_g061490 Hydrangea macrophylla
Hma1.2p1_0494F.1_g165210 Hydrangea macrophylla
Hma1.2p1_1471F.1_g285630 Hydrangea macrophylla
HPP92_025203 Vanilla planifolia
Hund18174 Selenicereus undatus
Lalb_Chr02g0146381 Lupinus albus
Lj1A24T62 Lonicera japonica
Lj2A1195G26 Lonicera japonica
Lj3A955T42 Lonicera japonica
Lj5g0001440 Lotus japonicus
Lsat_1_v5_gn_5_191301 Lactuca sativa
Lsat_1_v5_gn_9_5701 Lactuca sativa
Manes.01G219700 Manihot esculenta
Manes.05G061900 Manihot esculenta
Mapoly0005s0054 Marchantia polymorpha
MBI18_g06032_MAGBIO Magnolia biondii
MCO07G167 Micromonas commoda
MD03G1288700 Malus domestica
MD10G1116100 Malus domestica
MD10G1116200 Malus domestica
MD11G1309400 Malus domestica
Medtr1g088420 Medicago truncatula
MELO3C015998.2 Cucumis melo
Migut.D00149 Erythranthe guttata
MSTRG.21636 Avicennia marina
Nitab4.5_0001879g0150 Nicotiana tabacum
Nitab4.5_0002433g0070 Nicotiana tabacum
Nn3g21502 Nelumbo nucifera
Oeu046675.1 Olea europaea
Os03g0343400 Oryza sativa ssp. japonica
Peaxi162Scf00001g04232 Petunia axillaris
PGR044G0339 Punica granatum
PGR119G0359 Punica granatum
PGSC0003DMG400031812 Solanum tuberosum
Phvul.007G147100 Phaseolus vulgaris
Potri.002G204000 Populus trichocarpa
Potri.014G128500 Populus trichocarpa
Pp3c14_1530 Physcomitrium patens
Pp3c1_18130 Physcomitrium patens
Prupe.8G262000 Prunus persica
Psat6g165200 Pisum sativum
PSO210G6973 Papaver somniferum
PSO832G1198 Papaver somniferum
QL12p028410 Quercus lobata
RcHm_v2.0_Chr6g0294101 Rosa chinensis
Sabra02G0155200 Salix brachista
Sabra14G0095400 Salix brachista
SalBow3G1763 Salvia bowleyana
Sc05g0003800 Simmondsia chinensis
Sed0001482 Sechium edule
Sed0003394 Sechium edule
SEGI_10586 Sequoiadendron giganteum
SMO347G0090 Selaginella moellendorffii
Solyc09g075180.3 Solanum lycopersicum
Sopen09g030000 Solanum pennellii
Sp4g29520 Schrenkiella parvula
TAR365G0436 Trochodendron aralioides
TAR365G1108 Trochodendron aralioides
THA.LOC104817490 Tarenaya hassleriana
THA.LOC104827667 Tarenaya hassleriana
Thecc.01G301200 Theobroma cacao
Thhalv10001442m.g Eutrema salsugineum
TPR.G33985 Trifolium pratense
TWI59G0862 Tripterygium wilfordii
unitig_0.g1171 Utricularia gibba
vmacro15017 Vaccinium macrocarpon
VMungo0720G2512 Vigna mungo
Zm00001eb016450 Zea mays
Zm00001eb394950 Zea mays

User provided reference genes

Program Settings