Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Aa31LG11G14850 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5554 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.2571 Anthoceros agrestis
Actinidia21157 Actinidia chinensis
Actinidia24938 Actinidia chinensis
Ah.02g113910 Amaranthus hybridus
AL6G24710 Arabidopsis lyrata
Aqoxy5G00344 Aquilegia oxysepala
Aqoxy6G01670 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.TZR8AU Arachis hypogaea
AT5G14050 Arabidopsis thaliana
ATR0564G197 Amborella trichopoda
Atru.chr5.1578 Acer truncatum
AUR62008493 Chenopodium quinoa
AUR62008687 Chenopodium quinoa
AUR62021601 Chenopodium quinoa
AUR62025557 Chenopodium quinoa
AUR62037688 Chenopodium quinoa
BcaB01g06348 Brassica carinata
BcaNung06034 Brassica carinata
CANSAT35G0193 Cannabis sativa
CARHR199310 Cardamine hirsuta
Carub.0006s1224 Capsella rubella
Ca_00175_v3 Cicer arietinum L.
CBR_g21842 Chara braunii
Cc02_g22310 Coffea canephora
CDE02G2819 Ceratophyllum demersum
CDE04G3201 Ceratophyllum demersum
Cfa002330 Carpinus fangiana
Ciclev10006829m.g Citrus clementina
Ciclev10019516m.g Citrus clementina
CiPaw.03G257900 Carya illinoinensis
ClCG02G012250 Citrullus lanatus
ClCG07G000610 Citrullus lanatus
Cpa.g.sc200.5 Carica papaya
Cre06.g255950 Chlamydomonas reinhardtii
CsaV3_2G016400 Cucumis sativus L.
CSS0011909 Camellia sinensis var. sinensis
CSS0021329 Camellia sinensis var. sinensis
DCAR_002684 Daucus carota
Dinv22477 Davidia involucrata
Dinv34572 Davidia involucrata
Duzib147G1145 Durio zibethinus
ECA247G2036 Erigeron canadensis
EL10Ac5g11096 Beta vulgaris
Eucgr.K03309 Eucalyptus grandis
FAN04G2884 Fragaria x ananassa
FAN15G0975 Fragaria x ananassa
FAN18G2643 Fragaria x ananassa
FAN20G1740 Fragaria x ananassa
FAN24G1214 Fragaria x ananassa
FAN27G0650 Fragaria x ananassa
FvH4_2g22480 Fragaria vesca
FvH4_5g20520 Fragaria vesca
Glyma.13G255400 Glycine max
Glyma.15G059400 Glycine max
Gohir.A05G401500 Gossypium hirsutum
Gohir.A11G329100 Gossypium hirsutum
Gohir.D04G014300 Gossypium hirsutum
Gohir.D11G348100 Gossypium hirsutum
Gorai.007G378500 Gossypium raimondii
Gorai.012G016900 Gossypium raimondii
GSVIVG01000726001 Vitis vinifera
GSVIVG01003806001 Vitis vinifera
HanXRQChr14g0454081 Helianthus annuus
Haze_24536 Corylus avellana
Hma1.2p1_1029F.1_g249600 Hydrangea macrophylla
HPP92_022900 Vanilla planifolia
HPP92_026109 Vanilla planifolia
Hund02608 Selenicereus undatus
Lalb_Chr03g0030271 Lupinus albus
Lalb_Chr19g0134621 Lupinus albus
Lj1C59T1 Lonicera japonica
Lj1g0019097 Lotus japonicus
Lj1P543T22 Lonicera japonica
Lj6g0023367 Lotus japonicus
Lsat_1_v5_gn_8_3120 Lactuca sativa
Lsat_1_v5_gn_9_9921 Lactuca sativa
Manes.16G024300 Manihot esculenta
Mapoly0051s0055 Marchantia polymorpha
MBI12_g17287_MAGBIO Magnolia biondii
MBI17_g40264_MAGBIO Magnolia biondii
MCO01G264 Micromonas commoda
MD05G1205400 Malus domestica
MD10G1192400 Malus domestica
Medtr2g009800 Medicago truncatula
Medtr2g101620 Medicago truncatula
MELO3C020849.2 Cucumis melo
Migut.N02183 Erythranthe guttata
MSTRG.12540 Avicennia marina
Nitab4.5_0001370g0040 Nicotiana tabacum
Nitab4.5_0003006g0020 Nicotiana tabacum
Nitab4.5_0008299g0020 Nicotiana tabacum
Nitab4.5_0010414g0010 Nicotiana tabacum
Nn7g37931 Nelumbo nucifera
Oeu018172.1 Olea europaea
Os07g0603200 Oryza sativa ssp. japonica
Peaxi162Scf00045g00177 Petunia axillaris
PGR044G0331 Punica granatum
PGSC0003DMG400023686 Solanum tuberosum
Phvul.006G200700 Phaseolus vulgaris
Potri.005G218600 Populus trichocarpa
Pp3c26_4890 Physcomitrium patens
PRCOL_00000196 Prasinoderma coloniale
Prupe.5G054300 Prunus persica
Prupe.8G231800 Prunus persica
Psat1g046760 Pisum sativum
Psat1g214520 Pisum sativum
PSO210G0391 Papaver somniferum
PSO210G5187 Papaver somniferum
QL02p075842 Quercus lobata
QL02p076237 Quercus lobata
RcHm_v2.0_Chr6g0289431 Rosa chinensis
RcHm_v2.0_Chr7g0205871 Rosa chinensis
Rhsim01G0269300 Rhododendron simsii
Rhsim07G0080400 Rhododendron simsii
Sabra05G0167700 Salix brachista
SalBow3G3235 Salvia bowleyana
SalBow6G4122 Salvia bowleyana
Sc04g0003030 Simmondsia chinensis
Sed0015889 Sechium edule
SEGI_19346 Sequoiadendron giganteum
SGA_v2.0_scaffold80G25914 Striga asiatica
SHI13722 Sapria himalayana
SMO356G0724 Selaginella moellendorffii
Solyc10g080180.3 Solanum lycopersicum
Sopen10g030790 Solanum pennellii
Sp6g29950 Schrenkiella parvula
TAR383G0651 Trochodendron aralioides
TAR633G0331 Trochodendron aralioides
THA.LOC104806394 Tarenaya hassleriana
Thecc.01G159500 Theobroma cacao
Thecc.05G016300 Theobroma cacao
Thhalv10013183m.g Eutrema salsugineum
TPR.G9511 Trifolium pratense
TWI31G0602 Tripterygium wilfordii
unitig_8.g4702 Utricularia gibba
vmacro14869 Vaccinium macrocarpon
VMungo0540G2473 Vigna mungo
Zm00001eb227850 Zea mays

User provided reference genes

Program Settings