Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p14820 Brassica napus
Aa31LG6G6730 Aethionema arabicum
Actinidia09323 Actinidia chinensis
Actinidia09324 Actinidia chinensis
Ah.13g076500 Amaranthus hybridus
AL7G29870 Arabidopsis lyrata
Aqoxy2G00202 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0K9KEY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LXN0TE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R22IQ0 Arachis hypogaea
AT4G23540 Arabidopsis thaliana
ATR0730G042 Amborella trichopoda
Atru.chr1.1111 Acer truncatum
AUR62024456 Chenopodium quinoa
AUR62024457 Chenopodium quinoa
AUR62026046 Chenopodium quinoa
BcaC09g50980 Brassica carinata
BcaNung01063 Brassica carinata
BcaNung01064 Brassica carinata
BolC1t01774H Brassica oleracea
BraA01t01423Z Brassica rapa
C01p18510 Brassica napus
CAN.G676.32 Capsicum annuum
CANSAT80G2527 Cannabis sativa
CARHR230910 Cardamine hirsuta
Carub.0007s1775 Capsella rubella
Ca_26352_v3 Cicer arietinum L.
Cc02_g36160 Coffea canephora
Cc06_g17610 Coffea canephora
Cc06_g17620 Coffea canephora
CDE10G0506 Ceratophyllum demersum
CDE10G1259 Ceratophyllum demersum
Cfa016809 Carpinus fangiana
Ciclev10006456m.g Citrus clementina
CiPaw.09G038800 Carya illinoinensis
ClCG10G015770 Citrullus lanatus
COL.COLO4_28301 Corchorus olitorius
COL.COLO4_28302 Corchorus olitorius
Cpa.g.sc33.205 Carica papaya
CsaV3_3G040670 Cucumis sativus L.
CSS0037723 Camellia sinensis var. sinensis
DCAR_009063 Daucus carota
Dinv12498 Davidia involucrata
Dinv12499 Davidia involucrata
Duzib093G0255 Durio zibethinus
ECA247G0166 Erigeron canadensis
EL10Ac3g07096 Beta vulgaris
EL10Ac3g07097 Beta vulgaris
Eucgr.K01741 Eucalyptus grandis
Eucgr.K01742 Eucalyptus grandis
Eucgr.K01758 Eucalyptus grandis
Eucgr.K01775 Eucalyptus grandis
Eucgr.K01787 Eucalyptus grandis
Eucgr.K01788 Eucalyptus grandis
Eucgr.K01801 Eucalyptus grandis
Eucgr.K01988 Eucalyptus grandis
Eucgr.K01992 Eucalyptus grandis
Eucgr.K02004 Eucalyptus grandis
FAN02G3624 Fragaria x ananassa
FAN04G1199 Fragaria x ananassa
FAN05G1753 Fragaria x ananassa
FAN14G2551 Fragaria x ananassa
FvH4_6g24030 Fragaria vesca
Glyma.02G184900 Glycine max
Glyma.02G185000 Glycine max
Gohir.A11G312800 Gossypium hirsutum
Gohir.D11G329500 Gossypium hirsutum
Gorai.007G360700 Gossypium raimondii
GSVIVG01033265001 Vitis vinifera
HanXRQChr02g0038201 Helianthus annuus
HanXRQChr10g0296671 Helianthus annuus
Haze_19848 Corylus avellana
Hma1.2p1_1041F.1_g250970 Hydrangea macrophylla
Hma1.2p1_1041F.1_g250980 Hydrangea macrophylla
Hma1.2p1_1041F.1_g250990 Hydrangea macrophylla
Hma1.2p1_2078F.1_g313390 Hydrangea macrophylla
Hma1.2p1_3124F.1_g332880 Hydrangea macrophylla
Hma1.2p1_3124F.1_g332890 Hydrangea macrophylla
HPP92_012087 Vanilla planifolia
Hund24703 Selenicereus undatus
Lalb_Chr21g0316501 Lupinus albus
Lj5g0016851 Lotus japonicus
Lju124C42G12 Lonicera japonica
Lsat_1_v5_gn_6_98861 Lactuca sativa
Lsat_1_v5_gn_9_19021 Lactuca sativa
Lsat_1_v5_gn_9_19960 Lactuca sativa
Lsat_1_v5_gn_9_30560 Lactuca sativa
Manes.09G020800 Manihot esculenta
MBI04_g44704_MAGBIO Magnolia biondii
MBI13_g29599_MAGBIO Magnolia biondii
MBI19_g14335_MAGBIO Magnolia biondii
MBI19_g41435_MAGBIO Magnolia biondii
MBI19_g44839_MAGBIO Magnolia biondii
MD12G1075000 Malus domestica
MD14G1073500 Malus domestica
Medtr1g053255 Medicago truncatula
MELO3C009801.2 Cucumis melo
Migut.J01753 Erythranthe guttata
MSTRG.19857 Avicennia marina
Nitab4.5_0000586g0090 Nicotiana tabacum
Nitab4.5_0009615g0010 Nicotiana tabacum
Nn7g36309 Nelumbo nucifera
Oeu033011.1 Olea europaea
Os01g0957900 Oryza sativa ssp. japonica
Peaxi162Scf00130g00214 Petunia axillaris
PGR142G2644 Punica granatum
Phvul.007G252200 Phaseolus vulgaris
Potri.006G050000 Populus trichocarpa
Prupe.7G058600 Prunus persica
Psat6g118760 Pisum sativum
PSO063G4314 Papaver somniferum
PSO675G4789 Papaver somniferum
QL07p000798 Quercus lobata
QL07p000806 Quercus lobata
QL07p001861 Quercus lobata
RcHm_v2.0_Chr3g0482611 Rosa chinensis
Rhsim03G0025300 Rhododendron simsii
Rhsim09G0183100 Rhododendron simsii
Sabra06G0034900 Salix brachista
SalBow6G2278 Salvia bowleyana
Sc13g0001700 Simmondsia chinensis
Sed0004072 Sechium edule
SGA_v2.0_scaffold105G30404 Striga asiatica
SHI37393 Sapria himalayana
Solyc04g015940.3 Solanum lycopersicum
Sopen04g007950 Solanum pennellii
Sp7g21460 Schrenkiella parvula
TAR623G1060 Trochodendron aralioides
THA.LOC104804954 Tarenaya hassleriana
THA.LOC104806422 Tarenaya hassleriana
THA.LOC104807000 Tarenaya hassleriana
Thecc.05G152600 Theobroma cacao
Thhalv10024271m.g Eutrema salsugineum
TPR.G29097 Trifolium pratense
TWI74G0913 Tripterygium wilfordii
unitig_578.g15982 Utricularia gibba
vmacro07843 Vaccinium macrocarpon
VMungo0720G0235 Vigna mungo
VMungo0720G2535 Vigna mungo
Zm00001eb140500 Zea mays

User provided reference genes

Program Settings