Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p18110 Brassica napus
A04p12110 Brassica napus
Aa31LG3G11010 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3547 Anthoceros agrestis
Actinidia10742 Actinidia chinensis
Ah.01g018890 Amaranthus hybridus
Ah.13g076200 Amaranthus hybridus
AL7G25950 Arabidopsis lyrata
Aqoxy5G00324 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.67NMHM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E3581I Arachis hypogaea
AT4G26900 Arabidopsis thaliana
ATR0736G184 Amborella trichopoda
Atru.chr2.3483 Acer truncatum
AUR62013514 Chenopodium quinoa
AUR62026758 Chenopodium quinoa
BcaB06g27301 Brassica carinata
BcaNung03560 Brassica carinata
BcaNung03565 Brassica carinata
BcaNung03568 Brassica carinata
BolC1t02242H Brassica oleracea
BolC4t26162H Brassica oleracea
BraA01t01766Z Brassica rapa
BraA04t16876Z Brassica rapa
C01p23080 Brassica napus
C04p45770 Brassica napus
CAN.G337.72 Capsicum annuum
CAN.G677.16 Capsicum annuum
CANSAT11G1621 Cannabis sativa
CARHR234510 Cardamine hirsuta
Carub.0007s1395 Capsella rubella
Ca_14752_v3 Cicer arietinum L.
CBR_g4356 Chara braunii
CDE02G3624 Ceratophyllum demersum
Cfa020314 Carpinus fangiana
Cfa025092 Carpinus fangiana
Ciclev10007818m.g Citrus clementina
CiPaw.11G191900 Carya illinoinensis
ClCG09G010930 Citrullus lanatus
COL.COLO4_19537 Corchorus olitorius
Cpa.g.c34168 Carica papaya
Cpa.g.sc12.277 Carica papaya
Cre11.g481500 Chlamydomonas reinhardtii
CsaV3_7G021940 Cucumis sativus L.
CSS0000094 Camellia sinensis var. sinensis
CSS0007833 Camellia sinensis var. sinensis
DCAR_022578 Daucus carota
Dinv40776 Davidia involucrata
Duzib264G0382 Durio zibethinus
ECA246G3742 Erigeron canadensis
EL10Ac1g01638 Beta vulgaris
Eucgr.F00742 Eucalyptus grandis
FAN04G1963 Fragaria x ananassa
FAN08G0007 Fragaria x ananassa
FAN13G3021 Fragaria x ananassa
FAN18G4155 Fragaria x ananassa
FvH4_5g29730 Fragaria vesca
Glyma.08G323300 Glycine max
Glyma.18G093200 Glycine max
Glyma.18G108300 Glycine max
Gohir.A10G179900 Gossypium hirsutum
Gohir.A11G067600 Gossypium hirsutum
Gohir.D10G186800 Gossypium hirsutum
Gohir.D11G071500 Gossypium hirsutum
Gorai.007G076800 Gossypium raimondii
Gorai.011G209600 Gossypium raimondii
GSVIVG01037683001 Vitis vinifera
HanXRQChr05g0159411 Helianthus annuus
HanXRQChr08g0233501 Helianthus annuus
HanXRQChr08g0233821 Helianthus annuus
HanXRQChr08g0233831 Helianthus annuus
Haze_09705 Corylus avellana
Hma1.2p1_0036F.1_g023430 Hydrangea macrophylla
Hma1.2p1_0036F.1_g023440 Hydrangea macrophylla
HPP92_013494 Vanilla planifolia
HPP92_026047 Vanilla planifolia
Hund26666 Selenicereus undatus
Lalb_Chr10g0107081 Lupinus albus
Lj1A876G36 Lonicera japonica
Lj4g0024994 Lotus japonicus
Lsat_1_v5_gn_3_2301 Lactuca sativa
Lsat_1_v5_gn_3_69341 Lactuca sativa
Lsat_1_v5_gn_4_11281 Lactuca sativa
Lsat_1_v5_gn_5_3021 Lactuca sativa
Manes.03G132000 Manihot esculenta
Mapoly0071s0086 Marchantia polymorpha
MCO02G311 Micromonas commoda
MD03G1198000 Malus domestica
MD11G1213900 Malus domestica
MD11G1214000 Malus domestica
Medtr3g052850 Medicago truncatula
MELO3C013152.2 Cucumis melo
Migut.M01740 Erythranthe guttata
MSTRG.12985 Avicennia marina
MSTRG.14441 Avicennia marina
Nitab4.5_0013139g0010 Nicotiana tabacum
Nitab4.5_0022774g0010 Nicotiana tabacum
Nn8g38868 Nelumbo nucifera
Oeu013136.2 Olea europaea
Oeu062577.2 Olea europaea
Os03g0256400 Oryza sativa ssp. japonica
Peaxi162Scf00235g00424 Petunia axillaris
PGR083G1168 Punica granatum
PGSC0003DMG400022211 Solanum tuberosum
Phvul.006G046400 Phaseolus vulgaris
Potri.001G267400 Populus trichocarpa
Potri.009G061700 Populus trichocarpa
Pp3c1_20280 Physcomitrium patens
PRCOL_00006765 Prasinoderma coloniale
Prupe.4G217200 Prunus persica
Psat5g177120 Pisum sativum
PSO210G2842 Papaver somniferum
PSO832G3378 Papaver somniferum
QL08p009339 Quercus lobata
RcHm_v2.0_Chr4g0412471 Rosa chinensis
RcHm_v2.0_Chr5g0040621 Rosa chinensis
RcHm_v2.0_Chr5g0040671 Rosa chinensis
Rhsim06G0219700 Rhododendron simsii
Sabra16G0163900 Salix brachista
Sc02g0003710 Simmondsia chinensis
Sed0009199 Sechium edule
SEGI_16435 Sequoiadendron giganteum
SEGI_31768 Sequoiadendron giganteum
SGA_v2.0_scaffold172G39008 Striga asiatica
SMO119G0352 Selaginella moellendorffii
Solyc07g064810.3 Solanum lycopersicum
Sopen07g033000 Solanum pennellii
Sp7g24850 Schrenkiella parvula
TAR362G0117 Trochodendron aralioides
THA.LOC104811618 Tarenaya hassleriana
Thecc.09G123200 Theobroma cacao
Thhalv10024744m.g Eutrema salsugineum
TPR.G33794 Trifolium pratense
TPR.G39977 Trifolium pratense
TWI39G0824 Tripterygium wilfordii
unitig_85.g27329 Utricularia gibba
vmacro02220 Vaccinium macrocarpon
VMungo0540G1125 Vigna mungo
Zm00001eb011150 Zea mays
Zm00001eb081410 Zea mays

User provided reference genes

Program Settings