Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p04240 Brassica napus
A10p21860 Brassica napus
A10p21870 Brassica napus
Aa31LG11G12150 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.477 Anthoceros agrestis
Actinidia04557 Actinidia chinensis
Actinidia33804 Actinidia chinensis
AL6G28610 Arabidopsis lyrata
Aqoxy1G01762 Aquilegia oxysepala
Aqoxy3G04210 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.509DQ1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RW14FX Arachis hypogaea
AT5G17520 Arabidopsis thaliana
AT5G17523 Arabidopsis thaliana
ATR0369G003 Amborella trichopoda
Atru.chr12.1818 Acer truncatum
AUR62002252 Chenopodium quinoa
AUR62015463 Chenopodium quinoa
BcaB08g36764 Brassica carinata
BcaC03g13524 Brassica carinata
BcaC04g18781 Brassica carinata
BolC2t06824H Brassica oleracea
BolC9t58801H Brassica oleracea
BraA02t05387Z Brassica rapa
BraA10t44246Z Brassica rapa
C02p09120 Brassica napus
C09p59620 Brassica napus
CAN.G2009.1 Capsicum annuum
CANSAT21G0168 Cannabis sativa
CANSAT21G1370 Cannabis sativa
CANSAT21G1742 Cannabis sativa
CARHR195670 Cardamine hirsuta
Carub.0006s1575 Capsella rubella
Ca_19620_v3 Cicer arietinum L.
CBR_g17686 Chara braunii
CBR_g17688 Chara braunii
Cc10_g12920 Coffea canephora
CDE11G1065 Ceratophyllum demersum
Ciclev10031697m.g Citrus clementina
CiPaw.05G210900 Carya illinoinensis
CiPaw.06G037000 Carya illinoinensis
ClCG02G007870 Citrullus lanatus
COL.COLO4_32921 Corchorus olitorius
Cpa.g.sc43.152 Carica papaya
Cre12.g486600 Chlamydomonas reinhardtii
CsaV3_2G035860 Cucumis sativus L.
CSS0033101 Camellia sinensis var. sinensis
CSS0037967 Camellia sinensis var. sinensis
DCAR_009031 Daucus carota
Dinv17238 Davidia involucrata
Duzib177G1190 Durio zibethinus
ECA232G1465 Erigeron canadensis
EL10Ac3g05893 Beta vulgaris
Eucgr.A02993 Eucalyptus grandis
FAN03G1362 Fragaria x ananassa
FvH4_7g34281 Fragaria vesca
Glyma.09G223400 Glycine max
Glyma.12G013400 Glycine max
Gohir.A08G221634 Gossypium hirsutum
Gohir.A11G226000 Gossypium hirsutum
Gohir.D08G239900 Gossypium hirsutum
Gohir.D11G234600 Gossypium hirsutum
Gorai.004G255200 Gossypium raimondii
Gorai.007G246900 Gossypium raimondii
GSVIVG01024263001 Vitis vinifera
HanXRQChr05g0139001 Helianthus annuus
Haze_00348 Corylus avellana
Hma1.2p1_0419F.1_g149580 Hydrangea macrophylla
Hma1.2p1_0564F.1_g179310 Hydrangea macrophylla
HPP92_022763 Vanilla planifolia
HPP92_022764 Vanilla planifolia
Hund11857 Selenicereus undatus
Lalb_Chr01g0000721 Lupinus albus
Lj3A883T53 Lonicera japonica
Lj3g0010653 Lotus japonicus
Lsat_1_v5_gn_9_47941 Lactuca sativa
Manes.08G159200 Manihot esculenta
Manes.09G130400 Manihot esculenta
Mapoly0051s0014 Marchantia polymorpha
MBI04_g30781_MAGBIO Magnolia biondii
MCO10G093 Micromonas commoda
MD01G1240200 Malus domestica
MD07G1311300 Malus domestica
Medtr0172s0020 Medicago truncatula
MELO3C024754.2 Cucumis melo
Migut.C01041 Erythranthe guttata
Migut.N03237 Erythranthe guttata
MSTRG.22381 Avicennia marina
MSTRG.24194 Avicennia marina
Nitab4.5_0000299g0040 Nicotiana tabacum
Nitab4.5_0002990g0020 Nicotiana tabacum
Nn1g09227 Nelumbo nucifera
Nn3g19190 Nelumbo nucifera
Oeu015013.2 Olea europaea
Oeu030531.2 Olea europaea
Os04g0602400 Oryza sativa ssp. japonica
Peaxi162Scf00263g00323 Petunia axillaris
PGR008G0003 Punica granatum
PGR119G0933 Punica granatum
PGR131G0008 Punica granatum
PGSC0003DMG400024812 Solanum tuberosum
Phvul.011G016500 Phaseolus vulgaris
Potri.013G076100 Populus trichocarpa
Pp3c23_14070 Physcomitrium patens
Pp3c24_840 Physcomitrium patens
Pp3c24_890 Physcomitrium patens
Pp3c6_18710 Physcomitrium patens
PRCOL_00004977 Prasinoderma coloniale
Prupe.2G329800 Prunus persica
Psat0s2502g0200 Pisum sativum
PSO063G2098 Papaver somniferum
PSO782G1515 Papaver somniferum
RcHm_v2.0_Chr1g0384641 Rosa chinensis
Rhsim09G0214300 Rhododendron simsii
Sabra13G0065300 Salix brachista
Sabra19G0053800 Salix brachista
SalBow6G3313 Salvia bowleyana
SalBow7G2700 Salvia bowleyana
Sc03g0005650 Simmondsia chinensis
Sed0017544 Sechium edule
Sed0019262 Sechium edule
SEGI_37553 Sequoiadendron giganteum
SGA_v2.0_scaffold19G08642 Striga asiatica
SMO012G0030 Selaginella moellendorffii
SMO118G0252 Selaginella moellendorffii
Solyc04g064720.3 Solanum lycopersicum
Sopen04g026680 Solanum pennellii
Sopen04g026690 Solanum pennellii
Sp6g26700 Schrenkiella parvula
TAR375G1012 Trochodendron aralioides
TAR629G3426 Trochodendron aralioides
THA.LOC104802905 Tarenaya hassleriana
THA.LOC104820830 Tarenaya hassleriana
Thecc.05G227000 Theobroma cacao
Thhalv10016106m.g Eutrema salsugineum
TPR.G9827 Trifolium pratense
unitig_744.g24563 Utricularia gibba
vmacro22188 Vaccinium macrocarpon
VMungo0647G2360 Vigna mungo
Zm00001eb071770 Zea mays

User provided reference genes

Program Settings