Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p24100 Brassica napus
Aa31LG6G16520 Aethionema arabicum
Actinidia00613 Actinidia chinensis
Actinidia20501 Actinidia chinensis
Ah.01g022820 Amaranthus hybridus
AL7G10540 Arabidopsis lyrata
Aqoxy6G02237 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0G8G64 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F6L1N7 Arachis hypogaea
AT4G38300 Arabidopsis thaliana
AT4G38650 Arabidopsis thaliana
ATR0810G059 Amborella trichopoda
AUR62013056 Chenopodium quinoa
BcaB03g12217 Brassica carinata
BcaC01g00247 Brassica carinata
BolC3t19976H Brassica oleracea
BraA08t34365Z Brassica rapa
C03p77210 Brassica napus
CAN.G1.53 Capsicum annuum
CAN.G174.9 Capsicum annuum
CAN.G588.51 Capsicum annuum
CAN.G607.2 Capsicum annuum
CANSAT25G3525 Cannabis sativa
CARHR294370 Cardamine hirsuta
Carub.0007s0052 Capsella rubella
Ca_15306_v3 Cicer arietinum L.
Cc02_g16350 Coffea canephora
Cc02_g16360 Coffea canephora
CDE05G0730 Ceratophyllum demersum
Cfa005221 Carpinus fangiana
Ciclev10028121m.g Citrus clementina
Ciclev10030219m.g Citrus clementina
CiPaw.06G123500 Carya illinoinensis
COL.COLO4_17306 Corchorus olitorius
Cpa.g.sc37.165 Carica papaya
CsaV3_2G015900 Cucumis sativus L.
CSS0003924 Camellia sinensis var. sinensis
CSS0041825 Camellia sinensis var. sinensis
DCAR_022774 Daucus carota
Dinv41956 Davidia involucrata
Dinv41957 Davidia involucrata
Duzib052G0273 Durio zibethinus
Duzib132G1143 Durio zibethinus
ECA234G1031 Erigeron canadensis
ECA234G1289 Erigeron canadensis
EL10Ac9g21405 Beta vulgaris
Eucgr.G01773 Eucalyptus grandis
FAN15G1655 Fragaria x ananassa
FAN20G2205 Fragaria x ananassa
FAN24G1671 Fragaria x ananassa
FAN24G2362 Fragaria x ananassa
FAN27G1695 Fragaria x ananassa
FvH4_2g01510 Fragaria vesca
Glyma.04G004600 Glycine max
Glyma.06G004400 Glycine max
Gohir.A01G166300 Gossypium hirsutum
Gohir.D01G157500 Gossypium hirsutum
Gorai.002G195600 Gossypium raimondii
GSVIVG01024049001 Vitis vinifera
HanXRQChr08g0224871 Helianthus annuus
HanXRQChr08g0224881 Helianthus annuus
Haze_02163 Corylus avellana
Hma1.2p1_0032F.1_g019510 Hydrangea macrophylla
HPP92_004982 Vanilla planifolia
Hund00032 Selenicereus undatus
Lalb_Chr03g0025051 Lupinus albus
Lalb_Chr23g0265061 Lupinus albus
Lj1g0001472 Lotus japonicus
Lj5A182G116 Lonicera japonica
Lj5C182T6 Lonicera japonica
Lj9A391T52 Lonicera japonica
Lsat_1_v5_gn_4_73720 Lactuca sativa
Lsat_1_v5_gn_4_73780 Lactuca sativa
Manes.11G095700 Manihot esculenta
MBI11_g24564_MAGBIO Magnolia biondii
MD05G1119000 Malus domestica
MD10G1122000 Malus domestica
Medtr3g117800 Medicago truncatula
MELO3C020804.2 Cucumis melo
Migut.N01304 Erythranthe guttata
Nitab4.5_0000247g0020 Nicotiana tabacum
Nitab4.5_0000956g0040 Nicotiana tabacum
Nitab4.5_0001889g0150 Nicotiana tabacum
Nitab4.5_0001891g0090 Nicotiana tabacum
Nitab4.5_0005837g0090 Nicotiana tabacum
Nitab4.5_0006497g0010 Nicotiana tabacum
Nn5g30724 Nelumbo nucifera
Oeu006676.1 Olea europaea
Oeu063287.2 Olea europaea
Os03g0243700 Oryza sativa ssp. japonica
Os05g0304900 Oryza sativa ssp. japonica
Peaxi162Scf00042g02623 Petunia axillaris
Peaxi162Scf00362g00845 Petunia axillaris
Peaxi162Scf01221g00031 Petunia axillaris
PGR042G1477 Punica granatum
PGR042G3875 Punica granatum
PGSC0003DMG400006180 Solanum tuberosum
PGSC0003DMG400008420 Solanum tuberosum
PGSC0003DMG400012044 Solanum tuberosum
PGSC0003DMG400023204 Solanum tuberosum
PGSC0003DMG400034611 Solanum tuberosum
Phvul.009G120500 Phaseolus vulgaris
Potri.004G173300 Populus trichocarpa
Prupe.8G163400 Prunus persica
Psat5g002400 Pisum sativum
PSO541G4121 Papaver somniferum
PSO675G8095 Papaver somniferum
PSO724G1324 Papaver somniferum
QL11p049601 Quercus lobata
QL11p049670 Quercus lobata
RcHm_v2.0_Chr6g0244121 Rosa chinensis
Rhsim11G0191100 Rhododendron simsii
Sabra04G0115300 Salix brachista
SalBow1G0114 Salvia bowleyana
SalBow3G0470 Salvia bowleyana
Sc07g0007390 Simmondsia chinensis
Sed0003555 Sechium edule
SEGI_03048 Sequoiadendron giganteum
SEGI_26684 Sequoiadendron giganteum
SEGI_30822 Sequoiadendron giganteum
SGA_v2.0_scaffold80G25848 Striga asiatica
SMO197G0093 Selaginella moellendorffii
Solyc01g111340.4 Solanum lycopersicum
Solyc10g055370.2 Solanum lycopersicum
Solyc11g040330.2 Solanum lycopersicum
Sopen01g053400 Solanum pennellii
Sopen10g025150 Solanum pennellii
Sopen11g018330 Solanum pennellii
Sp7g37130 Schrenkiella parvula
TAR628G0526 Trochodendron aralioides
THA.LOC104807819 Tarenaya hassleriana
Thecc.02G063100 Theobroma cacao
Thecc.07G093300 Theobroma cacao
Thhalv10024805m.g Eutrema salsugineum
TPR.G38493 Trifolium pratense
TWI75G0740 Tripterygium wilfordii
unitig_899.g15608 Utricularia gibba
vmacro02267 Vaccinium macrocarpon
VMungo1309G0317 Vigna mungo
Zm00001eb010420 Zea mays
Zm00001eb420100 Zea mays

User provided reference genes

Program Settings