Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p07420 Brassica napus
A03p11910 Brassica napus
Aa31LG1G11690 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2511 Anthoceros agrestis
Actinidia08556 Actinidia chinensis
Actinidia25121 Actinidia chinensis
Ah.13g070300 Amaranthus hybridus
AL8G35370 Arabidopsis lyrata
Aqoxy1G00762 Aquilegia oxysepala
Aqoxy4G02649 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.IGF4QT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UR5XNC Arachis hypogaea
AT5G52370 Arabidopsis thaliana
AT5G58990 Arabidopsis thaliana
ATR0618G182 Amborella trichopoda
Atru.chr3.4040 Acer truncatum
AUR62001715 Chenopodium quinoa
BcaB01g04621 Brassica carinata
BcaB05g22467 Brassica carinata
BcaB08g36298 Brassica carinata
BcaC03g14063 Brassica carinata
BolC2t07410H Brassica oleracea
BolC3t13848H Brassica oleracea
BraA02t05820Z Brassica rapa
BraA03t10503Z Brassica rapa
BraA10t43707Z Brassica rapa
C02p12980 Brassica napus
C03p14010 Brassica napus
C09p51220 Brassica napus
CAN.G394.95 Capsicum annuum
CANSAT54G2064 Cannabis sativa
CARHR285220 Cardamine hirsuta
Carub.0008s1963 Capsella rubella
CBR_g8222 Chara braunii
Cc01_g13660 Coffea canephora
CDE07G0920 Ceratophyllum demersum
Cfa011626 Carpinus fangiana
Ciclev10029469m.g Citrus clementina
CiPaw.14G062800 Carya illinoinensis
ClCG02G019810 Citrullus lanatus
COL.COLO4_19070 Corchorus olitorius
Cpa.g.sc112.93 Carica papaya
CsaV3_6G016530 Cucumis sativus L.
CSS0037054 Camellia sinensis var. sinensis
CSS0039141 Camellia sinensis var. sinensis
DCAR_028257 Daucus carota
Dinv17075 Davidia involucrata
Dinv20930 Davidia involucrata
Dinv21014 Davidia involucrata
Dinv34320 Davidia involucrata
Dinv43019 Davidia involucrata
Dinv43078 Davidia involucrata
Duzib168G1893 Durio zibethinus
ECA247G0538 Erigeron canadensis
EL10Ac7g16097 Beta vulgaris
Eucgr.J01954 Eucalyptus grandis
FAN11G0559 Fragaria x ananassa
FAN16G3555 Fragaria x ananassa
FAN21G1258 Fragaria x ananassa
FAN25G0461 Fragaria x ananassa
FvH4_3g37450 Fragaria vesca
Glyma.11G111000 Glycine max
Glyma.12G037300 Glycine max
Glyma.13G341200 Glycine max
Glyma.15G033200 Glycine max
Gohir.A07G102200 Gossypium hirsutum
Gohir.D07G106400 Gossypium hirsutum
Gorai.001G114500 Gossypium raimondii
HanXRQChr03g0083951 Helianthus annuus
HanXRQChr04g0109301 Helianthus annuus
Haze_24230 Corylus avellana
Hma1.2p1_0543F.1_g175310 Hydrangea macrophylla
Hund04902 Selenicereus undatus
Lalb_Chr14g0372091 Lupinus albus
Lalb_Chr24g0397111 Lupinus albus
Lj3g0018318 Lotus japonicus
Lj4P191T41 Lonicera japonica
Lj6g0015977 Lotus japonicus
Lsat_1_v5_gn_9_25321 Lactuca sativa
Manes.02G123700 Manihot esculenta
Mapoly0002s0283 Marchantia polymorpha
MBI14_g28605_MAGBIO Magnolia biondii
MCO15G631 Micromonas commoda
MD03G1080100 Malus domestica
MD06G1146500 Malus domestica
MD11G1084700 Malus domestica
Medtr2g097890 Medicago truncatula
MELO3C025881.2 Cucumis melo
Migut.K01340 Erythranthe guttata
MSTRG.14035 Avicennia marina
Nitab4.5_0000744g0090 Nicotiana tabacum
Nitab4.5_0000933g0130 Nicotiana tabacum
Nitab4.5_0002718g0040 Nicotiana tabacum
Nn1g02876 Nelumbo nucifera
Nn3g19715 Nelumbo nucifera
Oeu002454.1 Olea europaea
Oeu017419.1 Olea europaea
Os02g0481000 Oryza sativa ssp. japonica
Peaxi162Scf01058g00152 Petunia axillaris
PGR119G2477 Punica granatum
PGSC0003DMG400030429 Solanum tuberosum
Phvul.011G039001 Phaseolus vulgaris
Phvul.011G206600 Phaseolus vulgaris
Potri.001G246800 Populus trichocarpa
Potri.009G040100 Populus trichocarpa
Pp3c9_8860 Physcomitrium patens
Prupe.6G065000 Prunus persica
Psat5g285800 Pisum sativum
PSO541G6474 Papaver somniferum
PSO675G4385 Papaver somniferum
QL01p028939 Quercus lobata
RcHm_v2.0_Chr5g0067341 Rosa chinensis
Rhsim13G0075100 Rhododendron simsii
Sabra09G0028200 Salix brachista
Sabra16G0149900 Salix brachista
SalBow4G1938 Salvia bowleyana
SalBow6G3269 Salvia bowleyana
Sc06g0008390 Simmondsia chinensis
Sed0010324 Sechium edule
SGA_v2.0_scaffold35G14025 Striga asiatica
SGA_v2.0_scaffold8G04342 Striga asiatica
SHI05895 Sapria himalayana
SMO111G0201 Selaginella moellendorffii
Solyc06g076620.3 Solanum lycopersicum
Sopen06g033010 Solanum pennellii
Sp6g20690 Schrenkiella parvula
TAR633G2482 Trochodendron aralioides
TAR636G0867 Trochodendron aralioides
THA.LOC104799412 Tarenaya hassleriana
THA.LOC104810736 Tarenaya hassleriana
Thecc.09G309200 Theobroma cacao
Thhalv10014944m.g Eutrema salsugineum
TPR.G6862 Trifolium pratense
TWI75G1302 Tripterygium wilfordii
TWI79G0177 Tripterygium wilfordii
unitig_26.g9774 Utricularia gibba
vmacro03009 Vaccinium macrocarpon
VMungo1127G1276 Vigna mungo
VMungo1127G1643 Vigna mungo
Zm00001eb066290 Zea mays
Zm00001eb433670 Zea mays

User provided reference genes

Program Settings