Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p32550 Brassica napus
A09p48110 Brassica napus
Aa31LG10G10060 Aethionema arabicum
Actinidia38226 Actinidia chinensis
Ah.16g107860 Amaranthus hybridus
AL5G36200 Arabidopsis lyrata
Aqoxy4G03096 Aquilegia oxysepala
Aqoxy4G03097 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.E1ZVHS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IBY72V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IYSU3D Arachis hypogaea
AT3G55080 Arabidopsis thaliana
ATR0827G006 Amborella trichopoda
ATR0827G034 Amborella trichopoda
ATR0827G035 Amborella trichopoda
Atru.chr12.595 Acer truncatum
Atru.chr12.596 Acer truncatum
AUR62025541 Chenopodium quinoa
AUR62042662 Chenopodium quinoa
BcaB01g00128 Brassica carinata
BcaC07g39828 Brassica carinata
BcaC07g39833 Brassica carinata
BolC8t50639H Brassica oleracea
BolC8t50642H Brassica oleracea
BolC8t50645H Brassica oleracea
BolC8t50648H Brassica oleracea
BolC8t50657H Brassica oleracea
BraA09t38797Z Brassica rapa
BraA09t40265Z Brassica rapa
C08p30350 Brassica napus
CANSAT56G3438 Cannabis sativa
CARHR165100 Cardamine hirsuta
Carub.0005s2171 Capsella rubella
Ca_11325_v3 Cicer arietinum L.
Cc02_g08680 Coffea canephora
CDE04G1829 Ceratophyllum demersum
Cfa001561 Carpinus fangiana
Ciclev10006223m.g Citrus clementina
Ciclev10023738m.g Citrus clementina
Ciclev10032643m.g Citrus clementina
CiPaw.01G279400 Carya illinoinensis
ClCG09G020200 Citrullus lanatus
COL.COLO4_05802 Corchorus olitorius
Cpa.g.sc1.299 Carica papaya
CsaV3_5G026250 Cucumis sativus L.
Dinv31388 Davidia involucrata
Duzib114G0593 Durio zibethinus
ECA238G2043 Erigeron canadensis
EL10Ac2g03507 Beta vulgaris
Eucgr.J01148 Eucalyptus grandis
FAN01G2148 Fragaria x ananassa
FAN01G2697 Fragaria x ananassa
FAN06G4140 Fragaria x ananassa
FAN06G4823 Fragaria x ananassa
FAN10G0581 Fragaria x ananassa
FvH4_7g20720 Fragaria vesca
Glyma.10G292500 Glycine max
Gohir.A05G352700 Gossypium hirsutum
Gohir.D04G060251 Gossypium hirsutum
Gorai.012G067000 Gossypium raimondii
GSVIVG01032632001 Vitis vinifera
HanXRQChr14g0460751 Helianthus annuus
Haze_16968 Corylus avellana
Hma1.2p1_0348F.1_g131700 Hydrangea macrophylla
Hma1.2p1_0348F.1_g131710 Hydrangea macrophylla
HPP92_021203 Vanilla planifolia
Hund06032 Selenicereus undatus
Lalb_Chr06g0164091 Lupinus albus
Lj8A92T86 Lonicera japonica
Lsat_1_v5_gn_2_115220 Lactuca sativa
Lsat_1_v5_gn_7_115640 Lactuca sativa
Manes.07G106500 Manihot esculenta
Mapoly0004s0106 Marchantia polymorpha
Mapoly0004s0119 Marchantia polymorpha
Mapoly0050s0063 Marchantia polymorpha
Mapoly0068s0008 Marchantia polymorpha
MD00G1163800 Malus domestica
MD01G1115300 Malus domestica
MD01G1115400 Malus domestica
MD01G1116200 Malus domestica
MD01G1116300 Malus domestica
MD01G1116400 Malus domestica
MD01G1116500 Malus domestica
MD01G1116800 Malus domestica
MD01G1117100 Malus domestica
Medtr1g115980 Medicago truncatula
MELO3C025470.2 Cucumis melo
Migut.A00396 Erythranthe guttata
Nitab4.5_0000271g0220 Nicotiana tabacum
Nitab4.5_0006265g0070 Nicotiana tabacum
Nn2g10556 Nelumbo nucifera
Oeu025610.1 Olea europaea
Os01g0976450 Oryza sativa ssp. japonica
Peaxi162Scf00629g00122 Petunia axillaris
PGR044G0090 Punica granatum
Phvul.007G007800 Phaseolus vulgaris
Potri.008G047400 Populus trichocarpa
Pp3c19_10210 Physcomitrium patens
Pp3c3_27330 Physcomitrium patens
Prupe.2G224300 Prunus persica
Psat6g238640 Pisum sativum
PSO063G5764 Papaver somniferum
QL08p057492 Quercus lobata
RcHm_v2.0_Chr1g0364981 Rosa chinensis
Sabra08G0033600 Salix brachista
SalBow4G2780 Salvia bowleyana
Sc09g0006860 Simmondsia chinensis
Sc09g0006880 Simmondsia chinensis
Sed0019162 Sechium edule
SEGI_06338 Sequoiadendron giganteum
SEGI_10741 Sequoiadendron giganteum
SEGI_20375 Sequoiadendron giganteum
SGA_v2.0_scaffold193G40685 Striga asiatica
SMO094G0001 Selaginella moellendorffii
SMO141G0013 Selaginella moellendorffii
SMO180G0001 Selaginella moellendorffii
SMO275G0053 Selaginella moellendorffii
SMO340G0223 Selaginella moellendorffii
SMO348G0083 Selaginella moellendorffii
SMO367G0043 Selaginella moellendorffii
SMO367G0191 Selaginella moellendorffii
SMO367G0389 Selaginella moellendorffii
SMO367G0666 Selaginella moellendorffii
SMO367G1094 Selaginella moellendorffii
SMO367G1158 Selaginella moellendorffii
SMO367G1161 Selaginella moellendorffii
Solyc06g036670.2 Solanum lycopersicum
Solyc06g036700.3 Solanum lycopersicum
Sopen06g012740 Solanum pennellii
Sopen06g012760 Solanum pennellii
Sp5g07340 Schrenkiella parvula
TAR623G0173 Trochodendron aralioides
THA.LOC104809996 Tarenaya hassleriana
Thecc.10G063300 Theobroma cacao
Thhalv10010346m.g Eutrema salsugineum
TPR.G10401 Trifolium pratense
TWI63G0851 Tripterygium wilfordii
unitig_26.g8857 Utricularia gibba
vmacro07107 Vaccinium macrocarpon
vmacro07108 Vaccinium macrocarpon
VMungo0720G1519 Vigna mungo

User provided reference genes

Program Settings