Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p18710 Brassica napus
A04p25690 Brassica napus
A05p12130 Brassica napus
Aa31LG1G20410 Aethionema arabicum
Aa31LG5G3900 Aethionema arabicum
Actinidia11364 Actinidia chinensis
Actinidia20831 Actinidia chinensis
Actinidia39922 Actinidia chinensis
Ah.04g155370 Amaranthus hybridus
Ah.13g072270 Amaranthus hybridus
AL4G29060 Arabidopsis lyrata
Aqoxy2G03723 Aquilegia oxysepala
AT2G33390 Arabidopsis thaliana
ATR0736G038 Amborella trichopoda
Atru.chr4.1933 Acer truncatum
AUR62002181 Chenopodium quinoa
AUR62015529 Chenopodium quinoa
BcaB02g10558 Brassica carinata
BcaB06g28682 Brassica carinata
BcaC01g05844 Brassica carinata
BcaC02g07831 Brassica carinata
BcaC02g11426 Brassica carinata
BcaC07g37337 Brassica carinata
BolC3t14568H Brassica oleracea
BolC4t23138H Brassica oleracea
BolC4t27768H Brassica oleracea
BolC8t47626H Brassica oleracea
BraA03t11131Z Brassica rapa
BraA04t18073Z Brassica rapa
BraA05t20157Z Brassica rapa
C03p21860 Brassica napus
C04p15700 Brassica napus
C04p62850 Brassica napus
C08p07780 Brassica napus
CAN.G220.90 Capsicum annuum
CANSAT78G0624 Cannabis sativa
CARHR127400 Cardamine hirsuta
Carub.0004s1502 Capsella rubella
Ca_11926_v3 Cicer arietinum L.
Cc03_g06010 Coffea canephora
CDE08G0603 Ceratophyllum demersum
Cfa014769 Carpinus fangiana
Ciclev10006301m.g Citrus clementina
CiPaw.01G179400 Carya illinoinensis
CiPaw.02G108100 Carya illinoinensis
ClCG05G004080 Citrullus lanatus
COL.COLO4_15946 Corchorus olitorius
CsaV3_3G011800 Cucumis sativus L.
CSS0013344 Camellia sinensis var. sinensis
CSS0022443 Camellia sinensis var. sinensis
DCAR_027337 Daucus carota
Dinv27096 Davidia involucrata
Duzib151G0481 Durio zibethinus
Duzib212G0290 Durio zibethinus
EL10Ac3g04956 Beta vulgaris
Eucgr.H02964 Eucalyptus grandis
FAN12G1687 Fragaria x ananassa
FAN17G2060 Fragaria x ananassa
FAN22G0728 Fragaria x ananassa
FAN22G1457 Fragaria x ananassa
FvH4_4g04340 Fragaria vesca
Glyma.10G136600 Glycine max
Glyma.10G189800 Glycine max
Glyma.20G086200 Glycine max
Glyma.20G201100 Glycine max
Gohir.A02G042200 Gossypium hirsutum
Gohir.A10G108400 Gossypium hirsutum
Gohir.D02G047800 Gossypium hirsutum
Gohir.D10G159400 Gossypium hirsutum
Gorai.005G053100 Gossypium raimondii
Gorai.011G179000 Gossypium raimondii
GSVIVG01027899001 Vitis vinifera
HanXRQChr01g0022901 Helianthus annuus
Hma1.2p1_0112F.1_g054570 Hydrangea macrophylla
Hma1.2p1_0385F.1_g141450 Hydrangea macrophylla
HPP92_007739 Vanilla planifolia
Hund03078 Selenicereus undatus
Lalb_Chr02g0150621 Lupinus albus
Lalb_Chr03g0037011 Lupinus albus
Lalb_Chr06g0169471 Lupinus albus
Lalb_Chr19g0128471 Lupinus albus
Lj5g0027748 Lotus japonicus
Lj6g0010293 Lotus japonicus
Lsat_1_v5_gn_1_75221 Lactuca sativa
Manes.03G160400 Manihot esculenta
Manes.15G044300 Manihot esculenta
MBI07_g18714_MAGBIO Magnolia biondii
MBI10_g38466_MAGBIO Magnolia biondii
MD13G1219400 Malus domestica
MD16G1224800 Malus domestica
Medtr1g045370 Medicago truncatula
Medtr1g073660 Medicago truncatula
Migut.G00489 Erythranthe guttata
Migut.N00292 Erythranthe guttata
Nitab4.5_0001051g0090 Nicotiana tabacum
Nitab4.5_0002709g0070 Nicotiana tabacum
Nn1g02914 Nelumbo nucifera
Nn3g19747 Nelumbo nucifera
Os03g0138400 Oryza sativa ssp. japonica
Peaxi162Scf00033g02837 Petunia axillaris
PGR031G0084 Punica granatum
PGSC0003DMG400017155 Solanum tuberosum
Phvul.007G271300 Phaseolus vulgaris
Phvul.L002444 Phaseolus vulgaris
Potri.008G170700 Populus trichocarpa
Potri.010G067200 Populus trichocarpa
Prupe.1G046100 Prunus persica
Psat6g107160 Pisum sativum
Psat6g117200 Pisum sativum
PSO674G0109 Papaver somniferum
PSO832G2786 Papaver somniferum
QL06p020702 Quercus lobata
RcHm_v2.0_Chr4g0394791 Rosa chinensis
RcHm_v2.0_Chr4g0394821 Rosa chinensis
Rhsim02G0042800 Rhododendron simsii
Rhsim03G0086000 Rhododendron simsii
Rhsim04G0173600 Rhododendron simsii
Sabra08G0130500 Salix brachista
Sabra10G0040200 Salix brachista
SalBow3G2868 Salvia bowleyana
Sc13g0006140 Simmondsia chinensis
Sed0012950 Sechium edule
Sed0016324 Sechium edule
Sed0016405 Sechium edule
Solyc09g090540.3 Solanum lycopersicum
Sopen09g033470 Solanum pennellii
Sp4g15710 Schrenkiella parvula
TAR362G0816 Trochodendron aralioides
TAR365G0748 Trochodendron aralioides
THA.LOC104816000 Tarenaya hassleriana
Thecc.04G261900 Theobroma cacao
Thhalv10017471m.g Eutrema salsugineum
TPR.G27310 Trifolium pratense
TPR.G28846 Trifolium pratense
TWI73G1305 Tripterygium wilfordii
unitig_26.g9548 Utricularia gibba
unitig_749.g13516 Utricularia gibba
vmacro08540 Vaccinium macrocarpon
vmacro15470 Vaccinium macrocarpon
VMungo0720G1758 Vigna mungo
Zm00001eb003130 Zea mays

User provided reference genes

Program Settings