Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p15970 Brassica napus
A03p55440 Brassica napus
Aa31LG4G9700 Aethionema arabicum
Actinidia29614 Actinidia chinensis
Actinidia30816 Actinidia chinensis
Ah.05g170690 Amaranthus hybridus
AL7G28580 Arabidopsis lyrata
Aqoxy5G01325 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4HU4LR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R1F113 Arachis hypogaea
AT4G24620 Arabidopsis thaliana
ATR0022G035 Amborella trichopoda
Atru.chr13.1040 Acer truncatum
AUR62019023 Chenopodium quinoa
AUR62027860 Chenopodium quinoa
BcaC06g32870 Brassica carinata
BcaC09g50847 Brassica carinata
BcaNung04959 Brassica carinata
BolC1t01923H Brassica oleracea
BolC7t45864H Brassica oleracea
BraA01t01531Z Brassica rapa
BraA03t14618Z Brassica rapa
C01p19950 Brassica napus
C07p53730 Brassica napus
CAN.G1375.13 Capsicum annuum
CAN.G175.14 Capsicum annuum
CANSAT25G1784 Cannabis sativa
CANSAT80G2842 Cannabis sativa
CARHR232010 Cardamine hirsuta
Carub.0007s1644 Capsella rubella
Ca_05403_v3 Cicer arietinum L.
Cc10_g15670 Coffea canephora
CDE10G0373 Ceratophyllum demersum
CDE10G0945 Ceratophyllum demersum
CDE10G1263 Ceratophyllum demersum
Ciclev10000603m.g Citrus clementina
CiPaw.07G167500 Carya illinoinensis
ClCG08G011800 Citrullus lanatus
Cpa.g.sc309.3 Carica papaya
CsaV3_2G030420 Cucumis sativus L.
CSS0030378 Camellia sinensis var. sinensis
CSS0034477 Camellia sinensis var. sinensis
CSS0045493 Camellia sinensis var. sinensis
DCAR_009571 Daucus carota
Dinv42631 Davidia involucrata
Dinv44842 Davidia involucrata
Duzib041G0775 Durio zibethinus
Duzib116G0753 Durio zibethinus
ECA232G1336 Erigeron canadensis
EL10Ac1g01079 Beta vulgaris
Eucgr.E02131 Eucalyptus grandis
Eucgr.F02133 Eucalyptus grandis
FAN04G2240 Fragaria x ananassa
FAN08G3511 Fragaria x ananassa
FAN13G1737 Fragaria x ananassa
FAN18G1491 Fragaria x ananassa
FvH4_5g35680 Fragaria vesca
Glyma.02G212600 Glycine max
Glyma.04G092400 Glycine max
Glyma.06G093000 Glycine max
Glyma.06G094300 Glycine max
Gohir.A05G220900 Gossypium hirsutum
Gohir.A06G032624 Gossypium hirsutum
Gohir.D05G223666 Gossypium hirsutum
Gohir.D06G032300 Gossypium hirsutum
Gorai.009G230800 Gossypium raimondii
Gorai.010G035600 Gossypium raimondii
GSVIVG01009147001 Vitis vinifera
HanXRQChr09g0250891 Helianthus annuus
Haze_22337 Corylus avellana
HPP92_024674 Vanilla planifolia
Hund16868 Selenicereus undatus
Lalb_Chr08g0242431 Lupinus albus
Lalb_Chr11g0065091 Lupinus albus
Lj1g0024653 Lotus japonicus
Lj4C734G7 Lonicera japonica
LjContig00408g0023356 Lotus japonicus
Lsat_1_v5_gn_9_74041 Lactuca sativa
Manes.02G146400 Manihot esculenta
Manes.18G060600 Manihot esculenta
Mapoly0057s0092 Marchantia polymorpha
MBI06_g36047_MAGBIO Magnolia biondii
MD08G1194100 Malus domestica
MD15G1382200 Malus domestica
Medtr5g065880 Medicago truncatula
MELO3C011104.2 Cucumis melo
Migut.N02863 Erythranthe guttata
MSTRG.22176 Avicennia marina
Nitab4.5_0000131g0420 Nicotiana tabacum
Nitab4.5_0003300g0010 Nicotiana tabacum
Nn1g05517 Nelumbo nucifera
Oeu016836.1 Olea europaea
Os08g0478800 Oryza sativa ssp. japonica
Os09g0465600 Oryza sativa ssp. japonica
Peaxi162Scf00281g00319 Petunia axillaris
PGR031G0272 Punica granatum
PGSC0003DMG400012910 Solanum tuberosum
Phvul.008G180200 Phaseolus vulgaris
Phvul.009G143550 Phaseolus vulgaris
Potri.002G104000 Populus trichocarpa
Pp3c16_3900 Physcomitrium patens
Pp3c27_3970 Physcomitrium patens
Prupe.1G528400 Prunus persica
Psat2g066440 Pisum sativum
PSO017G5756 Papaver somniferum
PSO170G6218 Papaver somniferum
QL09p017286 Quercus lobata
RcHm_v2.0_Chr7g0237251 Rosa chinensis
RcHm_v2.0_Chr7g0237311 Rosa chinensis
RcHm_v2.0_Chr7g0237321 Rosa chinensis
Rhsim06G0073600 Rhododendron simsii
Sabra02G0081500 Salix brachista
SalBow2G2226 Salvia bowleyana
Sc01g0001070 Simmondsia chinensis
Sed0003733 Sechium edule
Sed0007911 Sechium edule
SEGI_39500 Sequoiadendron giganteum
SGA_v2.0_scaffold28G11891 Striga asiatica
SGA_v2.0_scaffold48G17819 Striga asiatica
SHI06379 Sapria himalayana
SMO115G0176 Selaginella moellendorffii
Solyc04g076090.3 Solanum lycopersicum
Sopen00g007090 Solanum pennellii
Sp7g22610 Schrenkiella parvula
TAR381G0639 Trochodendron aralioides
TAR381G1629 Trochodendron aralioides
TAR625G0337 Trochodendron aralioides
THA.LOC104800044 Tarenaya hassleriana
THA.LOC104806836 Tarenaya hassleriana
Thecc.08G068600 Theobroma cacao
Thhalv10024695m.g Eutrema salsugineum
TPR.G28355 Trifolium pratense
TWI12G0831 Tripterygium wilfordii
TWI36G0898 Tripterygium wilfordii
unitig_578.g16183 Utricularia gibba
vmacro21320 Vaccinium macrocarpon
vmacro21321 Vaccinium macrocarpon
VMungo0647G1287 Vigna mungo
VMungo1309G2048 Vigna mungo
Zm00001eb101090 Zea mays
Zm00001eb315420 Zea mays

User provided reference genes

Program Settings