Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p27410 Brassica napus
Aa31LG7G15660 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2501 Anthoceros agrestis
Actinidia00620 Actinidia chinensis
Actinidia00622 Actinidia chinensis
Actinidia20510 Actinidia chinensis
Ah.01g022950 Amaranthus hybridus
AL4G10110 Arabidopsis lyrata
Aqoxy6G02177 Aquilegia oxysepala
Aqoxy6G02527 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.17PBCW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7HZ782 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H9ZTXG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QP6ZVD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WS10KT Arachis hypogaea
AT2G20980 Arabidopsis thaliana
ATR0078G008 Amborella trichopoda
Atru.chr5.3311 Acer truncatum
AUR62010046 Chenopodium quinoa
AUR62013038 Chenopodium quinoa
AUR62027127 Chenopodium quinoa
BcaB01g02961 Brassica carinata
BcaB07g29803 Brassica carinata
BcaC01g04861 Brassica carinata
BolC3t15631H Brassica oleracea
BraA03t11952Z Brassica rapa
C03p33040 Brassica napus
CAN.G588.74 Capsicum annuum
CANSAT25G2535 Cannabis sativa
CARHR111860 Cardamine hirsuta
Carub.0004s0005 Capsella rubella
Ca_15302_v3 Cicer arietinum L.
CBR_g870 Chara braunii
Cc02_g16220 Coffea canephora
CDE02G3657 Ceratophyllum demersum
Cfa005236 Carpinus fangiana
Cfa024303 Carpinus fangiana
Ciclev10028644m.g Citrus clementina
CiPaw.05G081500 Carya illinoinensis
CiPaw.06G122500 Carya illinoinensis
ClCG02G011890 Citrullus lanatus
COL.COLO4_17328 Corchorus olitorius
Cpa.g.sc37.143 Carica papaya
Cre07.g351400 Chlamydomonas reinhardtii
CsaV3_2G016060 Cucumis sativus L.
CSS0017687 Camellia sinensis var. sinensis
CSS0031508 Camellia sinensis var. sinensis
DCAR_022808 Daucus carota
Dinv41943 Davidia involucrata
Duzib132G0247 Durio zibethinus
Duzib248G0391 Durio zibethinus
ECA234G0878 Erigeron canadensis
EL10Ac9g21386 Beta vulgaris
Eucgr.I01413 Eucalyptus grandis
FAN06G2201 Fragaria x ananassa
FAN06G5031 Fragaria x ananassa
FAN11G3400 Fragaria x ananassa
FAN12G0591 Fragaria x ananassa
FAN14G4166 Fragaria x ananassa
FAN14G5753 Fragaria x ananassa
FAN20G1063 Fragaria x ananassa
FAN24G0607 Fragaria x ananassa
FAN24G2717 Fragaria x ananassa
FAN27G0272 Fragaria x ananassa
FvH4_1g02330 Fragaria vesca
FvH4_2g01260 Fragaria vesca
FvH4_2g23470 Fragaria vesca
FvH4_3g06660 Fragaria vesca
FvH4_4g05800 Fragaria vesca
FvH4_4g14930 Fragaria vesca
FvH4_5g37420 Fragaria vesca
FvH4_7g17270 Fragaria vesca
Glyma.04G003800 Glycine max
Glyma.20G072300 Glycine max
Gohir.A01G168100 Gossypium hirsutum
Gohir.D01G159100 Gossypium hirsutum
Gorai.002G197400 Gossypium raimondii
GSVIVG01024030001 Vitis vinifera
HanXRQChr10g0300911 Helianthus annuus
HanXRQChr15g0479941 Helianthus annuus
Haze_02147 Corylus avellana
HPP92_008341 Vanilla planifolia
Hund00025 Selenicereus undatus
Lalb_Chr23g0265011 Lupinus albus
Lj1g0009253 Lotus japonicus
Lj5A179T83 Lonicera japonica
Lsat_1_v5_gn_4_71580 Lactuca sativa
Manes.04G075600 Manihot esculenta
Mapoly0068s0001 Marchantia polymorpha
MBI08_g14630_MAGBIO Magnolia biondii
MCO03G518 Micromonas commoda
MD10G1095100 Malus domestica
Medtr3g117880 Medicago truncatula
MELO3C020815.2 Cucumis melo
Migut.B00085 Erythranthe guttata
MSTRG.19995 Avicennia marina
Nitab4.5_0005853g0010 Nicotiana tabacum
Nitab4.5_0006645g0060 Nicotiana tabacum
Nn5g30772 Nelumbo nucifera
Oeu026676.1 Olea europaea
Oeu050364.1 Olea europaea
Os09g0539400 Oryza sativa ssp. japonica
Peaxi162Scf00207g01375 Petunia axillaris
Peaxi162Scf00362g00651 Petunia axillaris
PGR142G1980 Punica granatum
PGSC0003DMG400006190 Solanum tuberosum
Phvul.009G119500 Phaseolus vulgaris
Potri.009G134500 Populus trichocarpa
Pp3c15_24300 Physcomitrium patens
Prupe.8G164900 Prunus persica
Psat5g002720 Pisum sativum
Psat5g306440 Pisum sativum
Psat7g019440 Pisum sativum
PSO541G4917 Papaver somniferum
PSO675G4200 Papaver somniferum
QL11p050170 Quercus lobata
RcHm_v2.0_Chr5g0048301 Rosa chinensis
RcHm_v2.0_Chr6g0251921 Rosa chinensis
Rhsim11G0191800 Rhododendron simsii
Sabra09G0104300 Salix brachista
SalBow1G2578 Salvia bowleyana
SalBow5G0458 Salvia bowleyana
Sc18g0006460 Simmondsia chinensis
Sed0003263 Sechium edule
SGA_v2.0_scaffold58G20372 Striga asiatica
SHI05731 Sapria himalayana
SMO192G0010 Selaginella moellendorffii
Solyc01g111550.3 Solanum lycopersicum
Sopen01g053590 Solanum pennellii
Sp4g00170 Schrenkiella parvula
TAR628G1195 Trochodendron aralioides
THA.LOC104807811 Tarenaya hassleriana
Thecc.02G060900 Theobroma cacao
Thecc.05G193800 Theobroma cacao
Thhalv10000193m.g Eutrema salsugineum
TPR.G38477 Trifolium pratense
TWI75G1548 Tripterygium wilfordii
unitig_37.g12834 Utricularia gibba
vmacro02274 Vaccinium macrocarpon
VMungo1309G0102 Vigna mungo
Zm00001eb331950 Zea mays

User provided reference genes

Program Settings