Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p08680 Brassica napus
A05p16540 Brassica napus
A08p06800 Brassica napus
Aa31LG9G4190 Aethionema arabicum
Actinidia27094 Actinidia chinensis
Ah.04g153780 Amaranthus hybridus
AL9U10100 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.G1SBH4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LF7IV9 Arachis hypogaea
AT4G13450 Arabidopsis thaliana
ATR0787G200 Amborella trichopoda
Atru.chr12.1110 Acer truncatum
Atru.chr4.1087 Acer truncatum
Atru.chr4.1898 Acer truncatum
AUR62002870 Chenopodium quinoa
AUR62010734 Chenopodium quinoa
AUR62035225 Chenopodium quinoa
BcaB03g16098 Brassica carinata
BcaB04g17687 Brassica carinata
BcaC02g09422 Brassica carinata
BcaC07g37362 Brassica carinata
BcaC08g44307 Brassica carinata
BolC4t25823H Brassica oleracea
BolC6t36927H Brassica oleracea
BolC8t47662H Brassica oleracea
BolC8t47664H Brassica oleracea
BraA04t16560Z Brassica rapa
BraA05t20558Z Brassica rapa
BraA08t32698Z Brassica rapa
C04p42440 Brassica napus
C06p17310 Brassica napus
C08p08090 Brassica napus
C08p08110 Brassica napus
CAN.G812.18 Capsicum annuum
CANSAT78G1811 Cannabis sativa
CARHR219090 Cardamine hirsuta
Carub.0007s2910 Capsella rubella
Ca_17859_v3 Cicer arietinum L.
Cc03_g06470 Coffea canephora
Cfa014796 Carpinus fangiana
Ciclev10006525m.g Citrus clementina
CiPaw.01G176800 Carya illinoinensis
CiPaw.02G105800 Carya illinoinensis
ClCG05G003930 Citrullus lanatus
COL.COLO4_15982 Corchorus olitorius
Cpa.g.sc59.15 Carica papaya
CsaV3_3G011600 Cucumis sativus L.
CSS0001601 Camellia sinensis var. sinensis
CSS0016929 Camellia sinensis var. sinensis
CSS0048740 Camellia sinensis var. sinensis
Dinv27122 Davidia involucrata
Dinv29795 Davidia involucrata
Duzib052G0032 Durio zibethinus
Duzib151G0254 Durio zibethinus
Duzib212G1028 Durio zibethinus
ECA247G2191 Erigeron canadensis
EL10Ac3g06679 Beta vulgaris
EL10Ac5g12825 Beta vulgaris
Eucgr.H02904 Eucalyptus grandis
FAN11G1796 Fragaria x ananassa
FAN12G4090 Fragaria x ananassa
FAN16G2551 Fragaria x ananassa
FAN17G2151 Fragaria x ananassa
FAN21G0806 Fragaria x ananassa
FAN22G2107 Fragaria x ananassa
FAN25G0383 Fragaria x ananassa
FvH4_3g38130 Fragaria vesca
FvH4_4g05010 Fragaria vesca
Glyma.05G165400 Glycine max
Glyma.08G122800 Glycine max
Gohir.A02G043500 Gossypium hirsutum
Gohir.A09G231000 Gossypium hirsutum
Gohir.D02G049100 Gossypium hirsutum
Gohir.D09G232100 Gossypium hirsutum
Gorai.005G054300 Gossypium raimondii
Gorai.006G254900 Gossypium raimondii
GSVIVG01027936001 Vitis vinifera
HanXRQChr15g0464561 Helianthus annuus
Haze_11480 Corylus avellana
HPP92_026009 Vanilla planifolia
Lalb_Chr07g0186031 Lupinus albus
Lalb_Chr12g0204701 Lupinus albus
Lalb_Chr13g0295511 Lupinus albus
Lj4g0004868 Lotus japonicus
Lj6A637T67 Lonicera japonica
Lsat_1_v5_gn_9_39921 Lactuca sativa
Manes.03G157600 Manihot esculenta
MBI10_g16813_MAGBIO Magnolia biondii
MD03G1076500 Malus domestica
MD11G1081000 Malus domestica
MD13G1223300 Malus domestica
MD16G1227600 Malus domestica
Medtr8g088230 Medicago truncatula
MELO3C006368.2 Cucumis melo
Migut.G00561 Erythranthe guttata
MSTRG.24651 Avicennia marina
Nitab4.5_0001041g0100 Nicotiana tabacum
Nitab4.5_0002613g0060 Nicotiana tabacum
Nitab4.5_0002613g0090 Nicotiana tabacum
Nitab4.5_0005154g0070 Nicotiana tabacum
Nn1g02990 Nelumbo nucifera
Nn3g19798 Nelumbo nucifera
Oeu020134.1 Olea europaea
Oeu047121.1 Olea europaea
Os10g0463300 Oryza sativa ssp. japonica
Peaxi162Scf00531g00325 Petunia axillaris
PGR004G0071 Punica granatum
PGR031G3217 Punica granatum
PGR118G0004 Punica granatum
PGSC0003DMG400001554 Solanum tuberosum
Phvul.002G245600 Phaseolus vulgaris
Potri.010G064800 Populus trichocarpa
Prupe.1G050300 Prunus persica
Prupe.6G061400 Prunus persica
Psat7g065120 Pisum sativum
PSO764G0162 Papaver somniferum
PSO832G0948 Papaver somniferum
QL06p021551 Quercus lobata
RcHm_v2.0_Chr4g0395821 Rosa chinensis
RcHm_v2.0_Chr5g0068561 Rosa chinensis
Rhsim04G0171000 Rhododendron simsii
SalBow3G0364 Salvia bowleyana
SalBow3G3922 Salvia bowleyana
Sed0004779 Sechium edule
Sed0020873 Sechium edule
SGA_v2.0_scaffold67G22675 Striga asiatica
Solyc09g090850.3 Solanum lycopersicum
Sopen09g033810 Solanum pennellii
Sp7g11010 Schrenkiella parvula
TAR633G0662 Trochodendron aralioides
THA.LOC104804645 Tarenaya hassleriana
THA.LOC104809104 Tarenaya hassleriana
Thecc.04G266600 Theobroma cacao
Thhalv10027024m.g Eutrema salsugineum
TPR.G21551 Trifolium pratense
TPR.G6786 Trifolium pratense
TWI09G0136 Tripterygium wilfordii
TWI53G2025 Tripterygium wilfordii
vmacro08563 Vaccinium macrocarpon
VMungo0251G0808 Vigna mungo
Zm00001eb222290 Zea mays

User provided reference genes

Program Settings