Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p26430 Brassica napus
Aa31LG6G1540 Aethionema arabicum
AL6G47810 Arabidopsis lyrata
Aqoxy4G02831 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.CT6H1M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K2P72U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LDL4WN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q11QUE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S3X3J8 Arachis hypogaea
AT4G04190 Arabidopsis thaliana
ATR0820G241 Amborella trichopoda
Atru.chr3.3335 Acer truncatum
AUR62009792 Chenopodium quinoa
AUR62039239 Chenopodium quinoa
BcaB01g01797 Brassica carinata
BcaC04g21280 Brassica carinata
BraA09t38217Z Brassica rapa
CAN.G1177.8 Capsicum annuum
CAN.G644.6 Capsicum annuum
CANSAT64G2769 Cannabis sativa
CARHR253330 Cardamine hirsuta
Carub.0006s3210 Capsella rubella
Ca_09074_v3 Cicer arietinum L.
CBR_g82609 Chara braunii
Cc01_g09520 Coffea canephora
CDE11G0319 Ceratophyllum demersum
Ciclev10029400m.g Citrus clementina
CiPaw.13G138500 Carya illinoinensis
COL.COLO4_19936 Corchorus olitorius
Cpa.g.sc32.130 Carica papaya
CsaV3_4G024870 Cucumis sativus L.
CSS0004713 Camellia sinensis var. sinensis
CSS0010276 Camellia sinensis var. sinensis
CSS0043339 Camellia sinensis var. sinensis
CSS0048581 Camellia sinensis var. sinensis
DCAR_001100 Daucus carota
Dinv29444 Davidia involucrata
Duzib150G0109 Durio zibethinus
Duzib168G0206 Durio zibethinus
ECA236G0310 Erigeron canadensis
EL10Ac7g15793 Beta vulgaris
Eucgr.J00466 Eucalyptus grandis
FAN11G1678 Fragaria x ananassa
FAN16G3468 Fragaria x ananassa
FAN21G1663 Fragaria x ananassa
FvH4_3g29610 Fragaria vesca
Glyma.12G183000 Glycine max
Glyma.13G318100 Glycine max
Gohir.A07G108700 Gossypium hirsutum
Gohir.A07G108780 Gossypium hirsutum
Gohir.D02G158550 Gossypium hirsutum
Gohir.D06G133032 Gossypium hirsutum
Gohir.D07G112500 Gossypium hirsutum
Gohir.D09G053026 Gossypium hirsutum
Gorai.001G120900 Gossypium raimondii
Gorai.003G055900 Gossypium raimondii
Gorai.003G076100 Gossypium raimondii
Gorai.005G178100 Gossypium raimondii
Gorai.006G055300 Gossypium raimondii
GSVIVG01036187001 Vitis vinifera
HanXRQChr13g0408991 Helianthus annuus
Haze_23424 Corylus avellana
Hma1.2p1_0305F.1_g119460 Hydrangea macrophylla
HPP92_006421 Vanilla planifolia
Hund18738 Selenicereus undatus
Lalb_Chr24g0395231 Lupinus albus
Lj2A987T34 Lonicera japonica
Lj2g0006626 Lotus japonicus
Lsat_1_v5_gn_8_117180 Lactuca sativa
Lsat_1_v5_gn_8_90380 Lactuca sativa
Manes.11G159700 Manihot esculenta
Manes.14G159600 Manihot esculenta
Mapoly0068s0054 Marchantia polymorpha
MBI17_g16878_MAGBIO Magnolia biondii
MD03G1139300 Malus domestica
MD11G1160800 Malus domestica
Medtr0227s0030 Medicago truncatula
Medtr4g073910 Medicago truncatula
Medtr4g088775 Medicago truncatula
MELO3C003122.2 Cucumis melo
Migut.N00940 Erythranthe guttata
MSTRG.18743 Avicennia marina
Nitab4.5_0003532g0010 Nicotiana tabacum
Nitab4.5_0021448g0010 Nicotiana tabacum
Nitab4.5_0024933g0010 Nicotiana tabacum
Nn2g14072 Nelumbo nucifera
Oeu046141.1 Olea europaea
Oeu050204.1 Olea europaea
Os01g0191000 Oryza sativa ssp. japonica
Os04g0410300 Oryza sativa ssp. japonica
Peaxi162Scf00544g00918 Petunia axillaris
PGR119G1280 Punica granatum
PGSC0003DMG400007409 Solanum tuberosum
Phvul.005G125900 Phaseolus vulgaris
Potri.009G146100 Populus trichocarpa
Pp3c27_2700 Physcomitrium patens
Prupe.6G124400 Prunus persica
Psat2g121320 Pisum sativum
Psat2g130440 Pisum sativum
PSO170G0247 Papaver somniferum
PSO339G0592 Papaver somniferum
PSO339G2689 Papaver somniferum
PSO384G0067 Papaver somniferum
PSO425G0036 Papaver somniferum
PSO782G3247 Papaver somniferum
PSO782G5408 Papaver somniferum
PSO801G0702 Papaver somniferum
QL02p014091 Quercus lobata
QL02p014117 Quercus lobata
RcHm_v2.0_Chr5g0054661 Rosa chinensis
RcHm_v2.0_Chr5g0054771 Rosa chinensis
RcHm_v2.0_Chr5g0054901 Rosa chinensis
Rhsim05G0032500 Rhododendron simsii
Rhsim13G0107700 Rhododendron simsii
Rhsim13G0108000 Rhododendron simsii
Rhsim13G0108200 Rhododendron simsii
Sabra09G0113000 Salix brachista
Sabra09G0115400 Salix brachista
SalBow6G5239 Salvia bowleyana
Sc15g0007560 Simmondsia chinensis
Sc21g0007210 Simmondsia chinensis
Sed0022012 Sechium edule
SEGI_17822 Sequoiadendron giganteum
SGA_v2.0_scaffold147G36360 Striga asiatica
Solyc11g067150.2 Solanum lycopersicum
Sopen11g026830 Solanum pennellii
Sp6g04610 Schrenkiella parvula
Sp7g17550 Schrenkiella parvula
TAR369G0691 Trochodendron aralioides
TAR623G0730 Trochodendron aralioides
THA.LOC104799541 Tarenaya hassleriana
Thecc.09G287800 Theobroma cacao
Thhalv10005498m.g Eutrema salsugineum
Thhalv10029010m.g Eutrema salsugineum
TPR.G2691 Trifolium pratense
TPR.G32973 Trifolium pratense
TWI79G0105 Tripterygium wilfordii
TWI79G0927 Tripterygium wilfordii
unitig_736.g22397 Utricularia gibba
vmacro03296 Vaccinium macrocarpon
Zm00001eb084080 Zea mays

User provided reference genes

Program Settings