Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p16080 Brassica napus
Aa31LG3G13950 Aethionema arabicum
Actinidia02527 Actinidia chinensis
Actinidia07539 Actinidia chinensis
AL8G34210 Arabidopsis lyrata
Aqoxy7G02584 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.GU0YFX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MPB88K Arachis hypogaea
AT5G58100 Arabidopsis thaliana
ATR0626G132 Amborella trichopoda
Atru.chr7.1024 Acer truncatum
AUR62020750 Chenopodium quinoa
AUR62027963 Chenopodium quinoa
BcaB08g36163 Brassica carinata
BcaC04g19907 Brassica carinata
BolC9t57854H Brassica oleracea
BraA10t43621Z Brassica rapa
C09p50010 Brassica napus
CAN.G57.4 Capsicum annuum
CANSAT80G0544 Cannabis sativa
CARHR271920 Cardamine hirsuta
Carub.0008s1866 Capsella rubella
Ca_25641_v3 Cicer arietinum L.
CBR_g22899 Chara braunii
CBR_g983 Chara braunii
Cc06_g23580 Coffea canephora
CDE05G2480 Ceratophyllum demersum
Ciclev10007431m.g Citrus clementina
CiPaw.07G231500 Carya illinoinensis
CiPaw.07G237900 Carya illinoinensis
ClCG03G011620 Citrullus lanatus
ClCG03G011630 Citrullus lanatus
COL.COLO4_08830 Corchorus olitorius
Cpa.g.sc91.76 Carica papaya
Cpa.g.sc91.77 Carica papaya
Cpa.g.sc91.78 Carica papaya
Cre16.g680450 Chlamydomonas reinhardtii
CsaV3_1G044170 Cucumis sativus L.
CSS0037198 Camellia sinensis var. sinensis
DCAR_020446 Daucus carota
Dinv12631 Davidia involucrata
Duzib168G0486 Durio zibethinus
Duzib170G1117 Durio zibethinus
ECA234G0362 Erigeron canadensis
EL10Ac2g03605 Beta vulgaris
Eucgr.C02153 Eucalyptus grandis
FAN12G3076 Fragaria x ananassa
FAN12G3464 Fragaria x ananassa
FAN22G0231 Fragaria x ananassa
FvH4_4g03800 Fragaria vesca
Glyma.01G000900 Glycine max
Glyma.08G360000 Glycine max
Gohir.A08G016900 Gossypium hirsutum
Gohir.D08G027300 Gossypium hirsutum
Gorai.004G024200 Gossypium raimondii
GSVIVG01034254001 Vitis vinifera
HanXRQChr10g0309401 Helianthus annuus
HanXRQChr14g0448901 Helianthus annuus
Haze_21246 Corylus avellana
Hma1.2p1_0394F.1_g143220 Hydrangea macrophylla
HPP92_015784 Vanilla planifolia
HPP92_015795 Vanilla planifolia
HPP92_015796 Vanilla planifolia
HPP92_015814 Vanilla planifolia
HPP92_015815 Vanilla planifolia
HPP92_015816 Vanilla planifolia
HPP92_015817 Vanilla planifolia
Hund03212 Selenicereus undatus
Hund19348 Selenicereus undatus
Lalb_Chr22g0361681 Lupinus albus
Lj2g0016843 Lotus japonicus
Lj5g0018939 Lotus japonicus
Lju50C34G1 Lonicera japonica
Lsat_1_v5_gn_3_57281 Lactuca sativa
Lsat_1_v5_gn_5_80020 Lactuca sativa
Manes.02G225500 Manihot esculenta
Mapoly0125s0017 Marchantia polymorpha
MBI16_g00817_MAGBIO Magnolia biondii
MBI16_g00818_MAGBIO Magnolia biondii
MBI16_g40729_MAGBIO Magnolia biondii
MCO06G232 Micromonas commoda
MD04G1001000 Malus domestica
Medtr5g019500 Medicago truncatula
MELO3C010012.2 Cucumis melo
MELO3C028251.2 Cucumis melo
Migut.L01612 Erythranthe guttata
MSTRG.26510 Avicennia marina
Nitab4.5_0000170g0280 Nicotiana tabacum
Nitab4.5_0000807g0220 Nicotiana tabacum
Nn8g41249 Nelumbo nucifera
Oeu021241.1 Olea europaea
Os02g0469200 Oryza sativa ssp. japonica
Os03g0570200 Oryza sativa ssp. japonica
Peaxi162Scf01347g00132 Petunia axillaris
PGR044G0827 Punica granatum
Potri.006G080700 Populus trichocarpa
Potri.018G150600 Populus trichocarpa
Pp3c14_21030 Physcomitrium patens
Prupe.1G001000 Prunus persica
Psat1g052040 Pisum sativum
PSO063G2947 Papaver somniferum
PSO170G3502 Papaver somniferum
QL01p000012 Quercus lobata
QL11p005809 Quercus lobata
QL11p006533 Quercus lobata
RcHm_v2.0_Chr4g0393651 Rosa chinensis
Rhsim01G0102600 Rhododendron simsii
SalBow2G0201 Salvia bowleyana
SalBow5G4830 Salvia bowleyana
SalBow6G0925 Salvia bowleyana
SalBow7G2907 Salvia bowleyana
SalBow8G4401 Salvia bowleyana
Sc25g0001730 Simmondsia chinensis
Sed0013671 Sechium edule
Sed0018574 Sechium edule
Sed0023758 Sechium edule
Sed0028124 Sechium edule
SEGI_37412 Sequoiadendron giganteum
SGA_v2.0_scaffold21G09589 Striga asiatica
SHI03158 Sapria himalayana
SHI03161 Sapria himalayana
SMO367G0058 Selaginella moellendorffii
Solyc07g042910.4 Solanum lycopersicum
Sopen07g022510 Solanum pennellii
Sp6g19790 Schrenkiella parvula
TAR383G0812 Trochodendron aralioides
THA.LOC104817833 Tarenaya hassleriana
Thecc.09G197300 Theobroma cacao
Thhalv10012595m.g Eutrema salsugineum
TPR.G18623 Trifolium pratense
TWI34G0889 Tripterygium wilfordii
unitig_899.g15185 Utricularia gibba
vmacro20731 Vaccinium macrocarpon
VMungo0464G0587 Vigna mungo
Zm00001eb016210 Zea mays
Zm00001eb035880 Zea mays
Zm00001eb063080 Zea mays
Zm00001eb175510 Zea mays
Zm00001eb240720 Zea mays
Zm00001eb270590 Zea mays
Zm00001eb357680 Zea mays

User provided reference genes

Program Settings