Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p23780 Brassica napus
A07p08880 Brassica napus
A07p41810 Brassica napus
Aa31LG4G6330 Aethionema arabicum
Actinidia29784 Actinidia chinensis
Actinidia37969 Actinidia chinensis
Ah.00g000410 Amaranthus hybridus
Ah.11g041040 Amaranthus hybridus
AL2G36320 Arabidopsis lyrata
Aqoxy6G01755 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.D59EVQ Arachis hypogaea
AT1G76240 Arabidopsis thaliana
ATR0661G095 Amborella trichopoda
Atru.chr13.154 Acer truncatum
AUR62036889 Chenopodium quinoa
BcaB05g24976 Brassica carinata
BcaC04g22821 Brassica carinata
BcaC08g47122 Brassica carinata
BcaC08g47275 Brassica carinata
BolC6t40060H Brassica oleracea
BraA07t31711Z Brassica rapa
C06p50200 Brassica napus
C09p14930 Brassica napus
CAN.G311.110 Capsicum annuum
CANSAT25G1315 Cannabis sativa
CARHR069800 Cardamine hirsuta
Carub.0002s2313 Capsella rubella
Ca_15442_v3 Cicer arietinum L.
Cc10_g00760 Coffea canephora
CDE02G3917 Ceratophyllum demersum
CDE04G2625 Ceratophyllum demersum
Cfa014058 Carpinus fangiana
Cfa014060 Carpinus fangiana
Ciclev10003381m.g Citrus clementina
Ciclev10010657m.g Citrus clementina
CiPaw.07G139700 Carya illinoinensis
ClCG08G009500 Citrullus lanatus
ClCG08G009560 Citrullus lanatus
ClCG11G018620 Citrullus lanatus
COL.COLO4_03996 Corchorus olitorius
Cpa.g.sc26.210 Carica papaya
CsaV3_4G037150 Cucumis sativus L.
CsaV3_6G031640 Cucumis sativus L.
CSS0046122 Camellia sinensis var. sinensis
DCAR_009526 Daucus carota
Dinv31930 Davidia involucrata
Duzib041G0263 Durio zibethinus
Duzib093G0457 Durio zibethinus
ECA232G4383 Erigeron canadensis
EL10Ac1g01984 Beta vulgaris
Eucgr.F01753 Eucalyptus grandis
FAN15G0671 Fragaria x ananassa
FAN27G2646 Fragaria x ananassa
FvH4_2g37580 Fragaria vesca
Glyma.04G018800 Glycine max
Glyma.06G019100 Glycine max
Gohir.A01G106900 Gossypium hirsutum
Gohir.A05G180100 Gossypium hirsutum
Gohir.D01G093300 Gossypium hirsutum
Gohir.D05G183100 Gossypium hirsutum
Gorai.002G118700 Gossypium raimondii
Gorai.009G188400 Gossypium raimondii
GSVIVG01008683001 Vitis vinifera
HanXRQChr05g0146821 Helianthus annuus
Haze_22755 Corylus avellana
HPP92_003498 Vanilla planifolia
HPP92_026895 Vanilla planifolia
Lalb_Chr03g0033641 Lupinus albus
Lj1g0016081 Lotus japonicus
Lsat_1_v5_gn_9_44960 Lactuca sativa
Manes.05G135200 Manihot esculenta
Manes.18G006100 Manihot esculenta
MBI08_g42655_MAGBIO Magnolia biondii
MD08G1003400 Malus domestica
Medtr3g115150 Medicago truncatula
MELO3C017013.2 Cucumis melo
MELO3C026545.2 Cucumis melo
Migut.C00947 Erythranthe guttata
Migut.C00951 Erythranthe guttata
Nitab4.5_0000337g0210 Nicotiana tabacum
Nitab4.5_0002710g0070 Nicotiana tabacum
Nn5g30919 Nelumbo nucifera
Nn6g31750 Nelumbo nucifera
Oeu004529.1 Olea europaea
Oeu011326.1 Olea europaea
Os06g0725500 Oryza sativa ssp. japonica
Os06g0725700 Oryza sativa ssp. japonica
Os06g0725800 Oryza sativa ssp. japonica
Os07g0237900 Oryza sativa ssp. japonica
Os10g0510200 Oryza sativa ssp. japonica
Os10g0542700 Oryza sativa ssp. japonica
Peaxi162Scf00400g00022 Petunia axillaris
Peaxi162Scf01481g00033 Petunia axillaris
PGR083G2156 Punica granatum
PGSC0003DMG400009973 Solanum tuberosum
Phvul.009G021700 Phaseolus vulgaris
Potri.002G011600 Populus trichocarpa
Potri.005G249500 Populus trichocarpa
Prupe.1G355300 Prunus persica
Psat5g011840 Pisum sativum
PSO170G2613 Papaver somniferum
PSO210G4940 Papaver somniferum
PSO541G6369 Papaver somniferum
PSO675G4094 Papaver somniferum
QL02p013914 Quercus lobata
RcHm_v2.0_Chr6g0304151 Rosa chinensis
Rhsim07G0254400 Rhododendron simsii
Rhsim07G0254500 Rhododendron simsii
Rhsim07G0254600 Rhododendron simsii
Sabra02G0009100 Salix brachista
Sabra02G0009200 Salix brachista
Sabra05G0193000 Salix brachista
SalBow7G2283 Salvia bowleyana
Sc15g0004480 Simmondsia chinensis
Sed0005663 Sechium edule
Sed0010871 Sechium edule
Sed0016603 Sechium edule
SGA_v2.0_scaffold108G30845 Striga asiatica
Solyc04g082270.3 Solanum lycopersicum
Sopen04g035890 Solanum pennellii
Sp5g31380 Schrenkiella parvula
TAR376G0017 Trochodendron aralioides
TAR628G1559 Trochodendron aralioides
THA.LOC104807040 Tarenaya hassleriana
THA.LOC104809754 Tarenaya hassleriana
THA.LOC104813758 Tarenaya hassleriana
Thecc.08G057400 Theobroma cacao
Thhalv10019441m.g Eutrema salsugineum
TPR.G38156 Trifolium pratense
TWI56G1025 Tripterygium wilfordii
unitig_0.g2103 Utricularia gibba
unitig_26.g9892 Utricularia gibba
unitig_747.g21520 Utricularia gibba
vmacro04400 Vaccinium macrocarpon
VMungo1309G1647 Vigna mungo
Zm00001eb002600 Zea mays
Zm00001eb043790 Zea mays
Zm00001eb074020 Zea mays
Zm00001eb228490 Zea mays
Zm00001eb272110 Zea mays
Zm00001eb393860 Zea mays

User provided reference genes

Program Settings