Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p24600 Brassica napus
A05p04100 Brassica napus
Aa31LG10G14100 Aethionema arabicum
Aa31LG1G25640 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1821 Anthoceros agrestis
Actinidia18399 Actinidia chinensis
Actinidia34566 Actinidia chinensis
Ah.07g203200 Amaranthus hybridus
AL4G42820 Arabidopsis lyrata
Aqoxy1G01859 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.D6NWCJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EMGW5K Arachis hypogaea
AT2G43945 Arabidopsis thaliana
AT3G59870 Arabidopsis thaliana
ATR0743G098 Amborella trichopoda
Atru.chr12.1711 Acer truncatum
Atru.chr12.1712 Acer truncatum
AUR62002482 Chenopodium quinoa
AUR62023710 Chenopodium quinoa
BcaB02g08884 Brassica carinata
BcaB06g29350 Brassica carinata
BcaC02g12350 Brassica carinata
BolC3t15280H Brassica oleracea
BolC4t22118H Brassica oleracea
BraA03t11665Z Brassica rapa
BraA05t19397Z Brassica rapa
C03p29330 Brassica napus
C04p04880 Brassica napus
CANSAT56G1087 Cannabis sativa
CARHR139120 Cardamine hirsuta
Carub.0004s2651 Capsella rubella
Carub.0005s2660 Capsella rubella
Ca_13540_v3 Cicer arietinum L.
CBR_g10867 Chara braunii
Cc03_g15990 Coffea canephora
CDE02G3676 Ceratophyllum demersum
CDE09G0694 Ceratophyllum demersum
Cfa008513 Carpinus fangiana
Ciclev10012405m.g Citrus clementina
CiPaw.01G201600 Carya illinoinensis
CiPaw.02G124600 Carya illinoinensis
ClCG09G014850 Citrullus lanatus
Cpa.g.sc151.6 Carica papaya
Cre16.g676450 Chlamydomonas reinhardtii
CsaV3_7G022350 Cucumis sativus L.
CSS0017727 Camellia sinensis var. sinensis
CSS0022736 Camellia sinensis var. sinensis
DCAR_005460 Daucus carota
Dinv24753 Davidia involucrata
Dinv33245 Davidia involucrata
Duzib128G1088 Durio zibethinus
Duzib177G0155 Durio zibethinus
ECA248G1232 Erigeron canadensis
EL10Ac3g06165 Beta vulgaris
Eucgr.H01440 Eucalyptus grandis
Eucgr.H01455 Eucalyptus grandis
Eucgr.L00810 Eucalyptus grandis
FAN23G1410 Fragaria x ananassa
FAN26G3138 Fragaria x ananassa
FAN28G0609 Fragaria x ananassa
FvH4_1g00160 Fragaria vesca
Glyma.07G273700 Glycine max
Glyma.17G000800 Glycine max
Gohir.A02G106300 Gossypium hirsutum
Gohir.D03G071700 Gossypium hirsutum
Gorai.003G088300 Gossypium raimondii
GSVIVG01026140001 Vitis vinifera
GSVIVG01038249001 Vitis vinifera
HanXRQChr01g0023651 Helianthus annuus
HanXRQChr11g0343501 Helianthus annuus
Haze_11131 Corylus avellana
HPP92_024700 Vanilla planifolia
Hund22588 Selenicereus undatus
Lalb_Chr18g0044961 Lupinus albus
Lalb_Chr18g0044971 Lupinus albus
Lj4g0016379 Lotus japonicus
Lj6C285T2 Lonicera japonica
Lsat_1_v5_gn_1_75001 Lactuca sativa
Lsat_1_v5_gn_1_76981 Lactuca sativa
Lsat_1_v5_gn_5_160100 Lactuca sativa
Manes.12G003300 Manihot esculenta
Manes.13G003200 Manihot esculenta
Mapoly0136s0029 Marchantia polymorpha
MBI07_g10354_MAGBIO Magnolia biondii
MBI07_g42072_MAGBIO Magnolia biondii
MCO05G102 Micromonas commoda
MD00G1087500 Malus domestica
MD15G1143300 Malus domestica
Medtr4g134910 Medicago truncatula
Migut.G00921 Erythranthe guttata
Migut.N03031 Erythranthe guttata
MSTRG.24552 Avicennia marina
MSTRG.9265 Avicennia marina
Nitab4.5_0000013g0040 Nicotiana tabacum
Nitab4.5_0008205g0010 Nicotiana tabacum
Nn3g18334 Nelumbo nucifera
Nn7g37463 Nelumbo nucifera
Oeu022910.1 Olea europaea
Os01g0338600 Oryza sativa ssp. japonica
Peaxi162Scf01205g00032 Petunia axillaris
PGR119G0486 Punica granatum
Phvul.003G074600 Phaseolus vulgaris
Potri.013G084300 Populus trichocarpa
Pp3c20_1670 Physcomitrium patens
Pp3c24_16460 Physcomitrium patens
Pp3c8_21410 Physcomitrium patens
PRCOL_00006877 Prasinoderma coloniale
Prupe.7G269700 Prunus persica
Psat4g001320 Pisum sativum
PSO675G2924 Papaver somniferum
PSO732G0217 Papaver somniferum
QL10p064332 Quercus lobata
RcHm_v2.0_Chr2g0084451 Rosa chinensis
Rhsim09G0003700 Rhododendron simsii
Sabra13G0078900 Salix brachista
SalBow3G4646 Salvia bowleyana
Sc25g0003040 Simmondsia chinensis
Sed0003231 Sechium edule
Sed0010932 Sechium edule
Sed0016168 Sechium edule
SEGI_26827 Sequoiadendron giganteum
SGA_v2.0_scaffold12G06218 Striga asiatica
SMO367G0538 Selaginella moellendorffii
Solyc08g015620.3 Solanum lycopersicum
Sopen08g005610 Solanum pennellii
Sp4g26040 Schrenkiella parvula
TAR365G1242 Trochodendron aralioides
TAR636G0539 Trochodendron aralioides
THA.LOC104802345 Tarenaya hassleriana
THA.LOC104804283 Tarenaya hassleriana
Thecc.05G186000 Theobroma cacao
Thhalv10001571m.g Eutrema salsugineum
TPR.G6015 Trifolium pratense
TWI36G0345 Tripterygium wilfordii
TWI36G1305 Tripterygium wilfordii
unitig_27.g25143 Utricularia gibba
unitig_699.g19464 Utricularia gibba
vmacro00721 Vaccinium macrocarpon
VMungo1215G3385 Vigna mungo
Zm00001eb159810 Zea mays
Zm00001eb356860 Zea mays

User provided reference genes

Program Settings