Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p06740 Brassica napus
Aa31sc202G40 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1921 Anthoceros agrestis
Actinidia00320 Actinidia chinensis
Actinidia02410 Actinidia chinensis
Ah.01g007220 Amaranthus hybridus
AL3G42000 Arabidopsis lyrata
Aqoxy6G00646 Aquilegia oxysepala
AT2G04305 Arabidopsis thaliana
ATR0800G083 Amborella trichopoda
Atru.chr6.1348 Acer truncatum
AUR62027083 Chenopodium quinoa
AUR62030922 Chenopodium quinoa
BcaB06g26775 Brassica carinata
BcaC06g35862 Brassica carinata
BolC7t41481H Brassica oleracea
BraA07t28467Z Brassica rapa
C07p10310 Brassica napus
CAN.G908.9 Capsicum annuum
CARHR102180 Cardamine hirsuta
Carub.0003s2601 Capsella rubella
Ca_00179_v3 Cicer arietinum L.
Cc02_g20610 Coffea canephora
CDE04G0284 Ceratophyllum demersum
CDE06G1646 Ceratophyllum demersum
Ciclev10028425m.g Citrus clementina
CiPaw.05G027100 Carya illinoinensis
CiPaw.06G160700 Carya illinoinensis
ClCG10G009790 Citrullus lanatus
Cpa.g.sc20.35 Carica papaya
Cpa.g.sc20.38 Carica papaya
CsaV3_4G014670 Cucumis sativus L.
CSS0038067 Camellia sinensis var. sinensis
DCAR_021894 Daucus carota
DCAR_029278 Daucus carota
DCAR_029279 Daucus carota
Dinv08970 Davidia involucrata
Dinv16030 Davidia involucrata
Duzib052G0292 Durio zibethinus
Duzib132G1162 Durio zibethinus
ECA234G3445 Erigeron canadensis
ECA236G3860 Erigeron canadensis
EL10Ac9g22123 Beta vulgaris
Eucgr.I02584 Eucalyptus grandis
FAN15G1055 Fragaria x ananassa
FAN20G2814 Fragaria x ananassa
FAN27G1475 Fragaria x ananassa
FvH4_2g11180 Fragaria vesca
Glyma.13G254800 Glycine max
Glyma.15G060000 Glycine max
Gohir.A03G178800 Gossypium hirsutum
Gohir.A04G116400 Gossypium hirsutum
Gohir.A13G049600 Gossypium hirsutum
Gohir.D02G202500 Gossypium hirsutum
Gohir.D04G158100 Gossypium hirsutum
Gohir.D13G048100 Gossypium hirsutum
Gorai.005G227400 Gossypium raimondii
Gorai.012G145500 Gossypium raimondii
Gorai.013G053700 Gossypium raimondii
GSVIVG01038516001 Vitis vinifera
HanXRQChr01g0009891 Helianthus annuus
HanXRQChr10g0291211 Helianthus annuus
Haze_10397 Corylus avellana
Hma1.2p1_0383F.1_g140540 Hydrangea macrophylla
Hma1.2p1_0435F.1_g152620 Hydrangea macrophylla
HPP92_016673 Vanilla planifolia
HPP92_019493 Vanilla planifolia
Hund00395 Selenicereus undatus
Lalb_Chr15g0090281 Lupinus albus
Lalb_Chr18g0060321 Lupinus albus
Lalb_Chr18g0060331 Lupinus albus
Lj5A225T68 Lonicera japonica
Lj6g0001628 Lotus japonicus
Lsat_1_v5_gn_5_110941 Lactuca sativa
Lsat_1_v5_gn_7_73760 Lactuca sativa
Lsat_1_v5_gn_7_82880 Lactuca sativa
Manes.07G046600 Manihot esculenta
Mapoly0036s0130 Marchantia polymorpha
MBI16_g10445_MAGBIO Magnolia biondii
MBI16_g42150_MAGBIO Magnolia biondii
MBI16_g43037_MAGBIO Magnolia biondii
MD05G1049600 Malus domestica
MD10G1056700 Malus domestica
Medtr2g010000 Medicago truncatula
MELO3C018046.2 Cucumis melo
Migut.B00524 Erythranthe guttata
MSTRG.23114 Avicennia marina
Nitab4.5_0000088g0020 Nicotiana tabacum
Nitab4.5_0002290g0050 Nicotiana tabacum
Nitab4.5_0004008g0090 Nicotiana tabacum
Nitab4.5_0006251g0010 Nicotiana tabacum
Nn1g05667 Nelumbo nucifera
Nn4g23949 Nelumbo nucifera
Nn5g29788 Nelumbo nucifera
Oeu010515.3 Olea europaea
Oeu059891.1 Olea europaea
Os08g0130000 Oryza sativa ssp. japonica
Peaxi162Scf00003g03028 Petunia axillaris
Peaxi162Scf00152g00730 Petunia axillaris
PGR142G0200 Punica granatum
PGSC0003DMG400004399 Solanum tuberosum
PGSC0003DMG402029578 Solanum tuberosum
Phvul.006G199900 Phaseolus vulgaris
Potri.001G285300 Populus trichocarpa
Potri.009G079600 Populus trichocarpa
Pp3c15_5630 Physcomitrium patens
Pp3c9_6010 Physcomitrium patens
Prupe.8G074900 Prunus persica
Psat1g212920 Pisum sativum
PSO532G0022 Papaver somniferum
PSO541G0041 Papaver somniferum
QL11p026578 Quercus lobata
RcHm_v2.0_Chr6g0269501 Rosa chinensis
Sabra09G0061600 Salix brachista
Sabra16G0177800 Salix brachista
SalBow6G5880 Salvia bowleyana
SalBow6G7210 Salvia bowleyana
Sed0006594 Sechium edule
Sed0007187 Sechium edule
SEGI_07926 Sequoiadendron giganteum
SGA_v2.0_scaffold219G42554 Striga asiatica
SGA_v2.0_scaffold32G12944 Striga asiatica
Solyc08g069000.4 Solanum lycopersicum
Solyc10g047820.1 Solanum lycopersicum
Sopen08g022650 Solanum pennellii
Sopen10g018750 Solanum pennellii
Sp6g01600 Schrenkiella parvula
TAR376G0949 Trochodendron aralioides
TAR381G0604 Trochodendron aralioides
TAR625G1028 Trochodendron aralioides
THA.LOC104808837 Tarenaya hassleriana
THA.LOC104815368 Tarenaya hassleriana
Thecc.02G125200 Theobroma cacao
Thhalv10002529m.g Eutrema salsugineum
TPR.G32658 Trifolium pratense
TWI14G0615 Tripterygium wilfordii
TWI59G1371 Tripterygium wilfordii
unitig_744.g24196 Utricularia gibba
vmacro01898 Vaccinium macrocarpon
vmacro23356 Vaccinium macrocarpon
VMungo0540G0195 Vigna mungo
Zm00001eb173240 Zea mays

User provided reference genes

Program Settings