Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p30770 Brassica napus
A07p22800 Brassica napus
Aa31LG10G11040 Aethionema arabicum
Aa31LG5G19180 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3192 Anthoceros agrestis
Actinidia29734 Actinidia chinensis
Ah.16g104010 Amaranthus hybridus
AL1G44650 Arabidopsis lyrata
AL4G11590 Arabidopsis lyrata
AL4G38220 Arabidopsis lyrata
AL5G37460 Arabidopsis lyrata
Aqoxy2G00769 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1N0RH8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.73F65L Arachis hypogaea
AT2G40400 Arabidopsis thaliana
AT3G56140 Arabidopsis thaliana
ATR0594G213 Amborella trichopoda
Atru.chr12.119 Acer truncatum
Atru.chr12.120 Acer truncatum
AUR62012321 Chenopodium quinoa
AUR62022961 Chenopodium quinoa
BcaB02g07667 Brassica carinata
BcaC02g07317 Brassica carinata
BcaC08g44762 Brassica carinata
BolC4t28323H Brassica oleracea
BolC6t37503H Brassica oleracea
BraA04t18535Z Brassica rapa
BraA07t29945Z Brassica rapa
C04p68170 Brassica napus
C04p68190 Brassica napus
C06p23300 Brassica napus
CAN.G659.7 Capsicum annuum
CANSAT56G0726 Cannabis sativa
CARHR135480 Cardamine hirsuta
CARHR166290 Cardamine hirsuta
Carub.0004s2264 Capsella rubella
Carub.0005s2289 Capsella rubella
Ca_15169_v3 Cicer arietinum L.
CBR_g38031 Chara braunii
Cc02_g05880 Coffea canephora
CDE07G0354 Ceratophyllum demersum
Cfa001256 Carpinus fangiana
Ciclev10030811m.g Citrus clementina
CiPaw.01G302600 Carya illinoinensis
ClCG11G005950 Citrullus lanatus
COL.COLO4_24867 Corchorus olitorius
Cpa.g.sc19.113 Carica papaya
CsaV3_6G002050 Cucumis sativus L.
CSS0002812 Camellia sinensis var. sinensis
DCAR_011861 Daucus carota
Dinv21799 Davidia involucrata
Duzib168G1941 Durio zibethinus
ECA238G1259 Erigeron canadensis
EL10Ac2g04913 Beta vulgaris
Eucgr.J00163 Eucalyptus grandis
FAN01G2884 Fragaria x ananassa
FAN03G1866 Fragaria x ananassa
FAN06G3146 Fragaria x ananassa
FAN06G3540 Fragaria x ananassa
FAN10G1819 Fragaria x ananassa
FvH4_7g25380 Fragaria vesca
Glyma.11G233800 Glycine max
Glyma.18G023200 Glycine max
Gohir.A07G124600 Gossypium hirsutum
Gohir.D07G128900 Gossypium hirsutum
Gorai.001G139200 Gossypium raimondii
GSVIVG01032735001 Vitis vinifera
HanXRQChr07g0203501 Helianthus annuus
Haze_17295 Corylus avellana
Hma1.2p1_1687F.1_g297510 Hydrangea macrophylla
HPP92_019705 Vanilla planifolia
HPP92_019734 Vanilla planifolia
Hund15866 Selenicereus undatus
Lalb_Chr08g0231381 Lupinus albus
Lalb_Chr11g0075101 Lupinus albus
Lj1C962G10 Lonicera japonica
Lj6g0017401 Lotus japonicus
Lj8A60T48 Lonicera japonica
Lsat_1_v5_gn_2_125780 Lactuca sativa
Manes.07G135966 Manihot esculenta
Manes.10G007200 Manihot esculenta
Manes.14G015672 Manihot esculenta
Mapoly0059s0064 Marchantia polymorpha
MBI03_g45955_MAGBIO Magnolia biondii
MD00G1159000 Malus domestica
MD01G1160000 Malus domestica
Medtr3g071970 Medicago truncatula
MELO3C008325.2 Cucumis melo
Migut.F00620 Erythranthe guttata
Migut.F01461 Erythranthe guttata
Migut.F01462 Erythranthe guttata
Nitab4.5_0001291g0130 Nicotiana tabacum
Nitab4.5_0002854g0050 Nicotiana tabacum
Nn2g11022 Nelumbo nucifera
Oeu008086.2 Olea europaea
Os01g0826900 Oryza sativa ssp. japonica
Peaxi162Scf00284g00235 Petunia axillaris
PGR044G0181 Punica granatum
PGSC0003DMG400023943 Solanum tuberosum
Phvul.001G247100 Phaseolus vulgaris
Potri.008G074300 Populus trichocarpa
Pp3c10_3610 Physcomitrium patens
Pp3c3_35080 Physcomitrium patens
Pp3c8_1750 Physcomitrium patens
Prupe.2G258000 Prunus persica
Psat5g126120 Pisum sativum
PSO339G3904 Papaver somniferum
PSO384G4720 Papaver somniferum
QL08p064026 Quercus lobata
RcHm_v2.0_Chr1g0371311 Rosa chinensis
RcHm_v2.0_Chr1g0371331 Rosa chinensis
Rhsim03G0148300 Rhododendron simsii
Sabra08G0055300 Salix brachista
SalBow3G0728 Salvia bowleyana
SalBow5G2006 Salvia bowleyana
SalBow5G3910 Salvia bowleyana
Sc11g0005470 Simmondsia chinensis
Sed0021910 Sechium edule
Sed0027098 Sechium edule
SEGI_11999 Sequoiadendron giganteum
SGA_v2.0_scaffold145G36000 Striga asiatica
SGA_v2.0_scaffold44G16654 Striga asiatica
SMO164G0201 Selaginella moellendorffii
Solyc06g050620.3 Solanum lycopersicum
Sopen06g016190 Solanum pennellii
Sp4g22720 Schrenkiella parvula
Sp5g06390 Schrenkiella parvula
TAR623G1694 Trochodendron aralioides
TAR636G0404 Trochodendron aralioides
THA.LOC104810131 Tarenaya hassleriana
Thecc.09G230400 Theobroma cacao
Thhalv10005804m.g Eutrema salsugineum
Thhalv10016304m.g Eutrema salsugineum
TPR.G29216 Trifolium pratense
TWI53G0536 Tripterygium wilfordii
unitig_62.g23927 Utricularia gibba
vmacro06911 Vaccinium macrocarpon
VMungo1383G3076 Vigna mungo
Zm00001eb149270 Zea mays
Zm00001eb149820 Zea mays
Zm00001eb351960 Zea mays
Zm00001eb441710 Zea mays

User provided reference genes

Program Settings