Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p25300 Brassica napus
Aa31LG3G14740 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2858 Anthoceros agrestis
Actinidia23970 Actinidia chinensis
Actinidia39397 Actinidia chinensis
Ah.06g194250 Amaranthus hybridus
AL6G23410 Arabidopsis lyrata
Aqoxy2G00128 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.48A50S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GHW2P2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KKIJ5Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TKPQ9K Arachis hypogaea
AT5G12860 Arabidopsis thaliana
ATR0605G025 Amborella trichopoda
Atru.chr3.2726 Acer truncatum
AUR62019297 Chenopodium quinoa
BcaB08g37016 Brassica carinata
BcaC04g19175 Brassica carinata
BolC9t59268H Brassica oleracea
BraA10t44592Z Brassica rapa
C09p64310 Brassica napus
CAN.G1789.1 Capsicum annuum
CANSAT54G0044 Cannabis sativa
CARHR200590 Cardamine hirsuta
Carub.0006s1105 Capsella rubella
Ca_11282_v3 Cicer arietinum L.
CBR_g8933 Chara braunii
Cc08_g17180 Coffea canephora
CDE10G0225 Ceratophyllum demersum
Cfa009768 Carpinus fangiana
Ciclev10014769m.g Citrus clementina
CiPaw.13G161100 Carya illinoinensis
ClCG02G023250 Citrullus lanatus
COL.COLO4_02786 Corchorus olitorius
Cpa.g.sc84.58 Carica papaya
Cre17.g713200 Chlamydomonas reinhardtii
Cre17.g713350 Chlamydomonas reinhardtii
CsaV3_4G024240 Cucumis sativus L.
CSS0018404 Camellia sinensis var. sinensis
DCAR_029950 Daucus carota
Dinv36263 Davidia involucrata
Duzib150G1517 Durio zibethinus
Duzib168G0359 Durio zibethinus
ECA248G2930 Erigeron canadensis
EL10Ac4g10256 Beta vulgaris
EL10Ac4g10273 Beta vulgaris
Eucgr.J00769 Eucalyptus grandis
FAN11G0250 Fragaria x ananassa
FAN16G1981 Fragaria x ananassa
FAN21G1446 Fragaria x ananassa
FAN25G2948 Fragaria x ananassa
FvH4_3g28880 Fragaria vesca
Glyma.11G133800 Glycine max
Glyma.12G058000 Glycine max
Gohir.A09G114600 Gossypium hirsutum
Gohir.D09G037940 Gossypium hirsutum
Gohir.D09G111300 Gossypium hirsutum
Gohir.D09G174050 Gossypium hirsutum
Gorai.005G130700 Gossypium raimondii
Gorai.006G129000 Gossypium raimondii
Gorai.009G127300 Gossypium raimondii
Gorai.011G165400 Gossypium raimondii
GSVIVG01025268001 Vitis vinifera
HanXRQChr10g0291111 Helianthus annuus
HanXRQChr13g0405851 Helianthus annuus
Haze_23134 Corylus avellana
Hma1.2p1_0861F.1_g229690 Hydrangea macrophylla
HPP92_023575 Vanilla planifolia
Hund07512 Selenicereus undatus
Hund07513 Selenicereus undatus
Hund22032 Selenicereus undatus
Lalb_Chr03g0026341 Lupinus albus
Lalb_Chr24g0397091 Lupinus albus
Lj1A331T23 Lonicera japonica
Lj3g0011907 Lotus japonicus
Lsat_1_v5_gn_1_66101 Lactuca sativa
Manes.06G164600 Manihot esculenta
Manes.14G002500 Manihot esculenta
Mapoly0100s0052 Marchantia polymorpha
MBI01_g18880_MAGBIO Magnolia biondii
MCO14G580 Micromonas commoda
MD03G1175800 Malus domestica
MD11G1193500 Malus domestica
Medtr4g065007 Medicago truncatula
MELO3C014596.2 Cucumis melo
Migut.D00599 Erythranthe guttata
Migut.N02316 Erythranthe guttata
MSTRG.12469 Avicennia marina
MSTRG.17592 Avicennia marina
Nitab4.5_0005819g0020 Nicotiana tabacum
Nitab4.5_0006559g0010 Nicotiana tabacum
Nn037s41628 Nelumbo nucifera
Nn2g15384 Nelumbo nucifera
Nn2g15401 Nelumbo nucifera
Nn2g15411 Nelumbo nucifera
Nn7g36197 Nelumbo nucifera
Oeu015665.1 Olea europaea
Oeu025866.1 Olea europaea
Oeu043296.1 Olea europaea
Oeu063321.1 Olea europaea
Os12g0515400 Oryza sativa ssp. japonica
Peaxi162Scf00004g02316 Petunia axillaris
PGR119G1402 Punica granatum
PGSC0003DMG400007359 Solanum tuberosum
Phvul.011G059900 Phaseolus vulgaris
Potri.001G258600 Populus trichocarpa
Potri.009G053800 Populus trichocarpa
Pp3c18_1460 Physcomitrium patens
Pp3c18_1490 Physcomitrium patens
PRCOL_00001596 Prasinoderma coloniale
Prupe.4G248000 Prunus persica
Psat7g212080 Pisum sativum
PSO210G3020 Papaver somniferum
PSO210G5994 Papaver somniferum
QL01p004767 Quercus lobata
RcHm_v2.0_Chr5g0051981 Rosa chinensis
Rhsim01G0191600 Rhododendron simsii
Sabra09G0039100 Salix brachista
Sabra16G0158300 Salix brachista
SalBow5G5273 Salvia bowleyana
SalBow8G3065 Salvia bowleyana
Sc09g0000690 Simmondsia chinensis
Sed0001047 Sechium edule
SEGI_36553 Sequoiadendron giganteum
SGA_v2.0_scaffold42G16103 Striga asiatica
SGA_v2.0_scaffold8G04594 Striga asiatica
SMO353G0233 Selaginella moellendorffii
Solyc11g065830.2 Solanum lycopersicum
Sopen11g025580 Solanum pennellii
Sp6g31090 Schrenkiella parvula
TAR623G1461 Trochodendron aralioides
TAR633G0802 Trochodendron aralioides
THA.LOC104811166 Tarenaya hassleriana
Thecc.09G233000 Theobroma cacao
Thhalv10013154m.g Eutrema salsugineum
TPR.G31971 Trifolium pratense
TWI32G0018 Tripterygium wilfordii
TWI60G1385 Tripterygium wilfordii
unitig_22.g6204 Utricularia gibba
vmacro12716 Vaccinium macrocarpon
VMungo1127G1863 Vigna mungo
Zm00001eb410930 Zea mays

User provided reference genes

Program Settings