Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p00830 Brassica napus
A09p47660 Brassica napus
Aa31LG5G80 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1379 Anthoceros agrestis
Actinidia12159 Actinidia chinensis
Actinidia40393 Actinidia chinensis
Ah.08g218760 Amaranthus hybridus
AL6G53490 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.PVA962 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TVCQ13 Arachis hypogaea
AT4G00026 Arabidopsis thaliana
ATR0767G019 Amborella trichopoda
Atru.chr10.1194 Acer truncatum
AUR62001190 Chenopodium quinoa
AUR62022137 Chenopodium quinoa
BcaB01g02184 Brassica carinata
BcaB01g02205 Brassica carinata
BcaB02g08455 Brassica carinata
BcaC07g39791 Brassica carinata
BolC8t50598H Brassica oleracea
BolC9t52939H Brassica oleracea
BraA09t35678Z Brassica rapa
BraA09t40222Z Brassica rapa
C08p29870 Brassica napus
C09p00040 Brassica napus
CAN.G532.17 Capsicum annuum
CANSAT01G0875 Cannabis sativa
CANSAT01G1592 Cannabis sativa
CANSAT01G3075 Cannabis sativa
CARHR248050 Cardamine hirsuta
Carub.0006s3720 Capsella rubella
Ca_09921_v3 Cicer arietinum L.
Cc00_g20470 Coffea canephora
CDE11G0157 Ceratophyllum demersum
Cfa016649 Carpinus fangiana
Ciclev10021461m.g Citrus clementina
CiPaw.03G272900 Carya illinoinensis
ClCG08G008500 Citrullus lanatus
COL.COLO4_12437 Corchorus olitorius
Cpa.g.sc5.224 Carica papaya
Cre09.g405550 Chlamydomonas reinhardtii
CsaV3_6G004490 Cucumis sativus L.
CSS0006054 Camellia sinensis var. sinensis
CSS0016661 Camellia sinensis var. sinensis
CSS0037426 Camellia sinensis var. sinensis
CSS0044998 Camellia sinensis var. sinensis
CSS0048018 Camellia sinensis var. sinensis
CSS0049638 Camellia sinensis var. sinensis
DCAR_025031 Daucus carota
DCAR_025077 Daucus carota
Dinv43641 Davidia involucrata
Dinv44079 Davidia involucrata
Duzib133G0823 Durio zibethinus
Duzib138G0956 Durio zibethinus
ECA240G4071 Erigeron canadensis
EL10Ac7g17978 Beta vulgaris
Eucgr.D01508 Eucalyptus grandis
Eucgr.D01510 Eucalyptus grandis
FAN01G2831 Fragaria x ananassa
FAN03G2170 Fragaria x ananassa
FAN19G1210 Fragaria x ananassa
FAN23G0109 Fragaria x ananassa
FAN23G2762 Fragaria x ananassa
FAN28G0427 Fragaria x ananassa
FvH4_7g06430 Fragaria vesca
Glyma.08G276700 Glycine max
Glyma.10G175000 Glycine max
Glyma.20G215800 Glycine max
Gohir.A08G059500 Gossypium hirsutum
Gohir.D08G068700 Gossypium hirsutum
Gorai.004G072000 Gossypium raimondii
GSVIVG01022807001 Vitis vinifera
HanXRQChr11g0351331 Helianthus annuus
HanXRQChr13g0422791 Helianthus annuus
Hma1.2p1_1740F.1_g300050 Hydrangea macrophylla
HPP92_021019 Vanilla planifolia
Hund14311 Selenicereus undatus
Lalb_Chr02g0149681 Lupinus albus
Lalb_Chr21g0311731 Lupinus albus
Lj5g0022618 Lotus japonicus
Lju41A43T28 Lonicera japonica
Lsat_1_v5_gn_3_129561 Lactuca sativa
Manes.05G052500 Manihot esculenta
Mapoly0168s0006 Marchantia polymorpha
MCO09G641 Micromonas commoda
MD05G1185000 Malus domestica
MD10G1173000 Malus domestica
Medtr1g077430 Medicago truncatula
MELO3C019920.2 Cucumis melo
Migut.N01756 Erythranthe guttata
MSTRG.4922 Avicennia marina
Nitab4.5_0001818g0050 Nicotiana tabacum
Nitab4.5_0002874g0100 Nicotiana tabacum
Nn1g00907 Nelumbo nucifera
Nn6g33862 Nelumbo nucifera
Oeu018737.2 Olea europaea
Oeu018739.1 Olea europaea
Oeu063991.1 Olea europaea
Os03g0253800 Oryza sativa ssp. japonica
Peaxi162Scf00392g00124 Petunia axillaris
PGR004G2692 Punica granatum
PGSC0003DMG401012327 Solanum tuberosum
PGSC0003DMG402012327 Solanum tuberosum
Phvul.L007001 Phaseolus vulgaris
Potri.002G140700 Populus trichocarpa
Potri.014G054400 Populus trichocarpa
Pp3c2_16760 Physcomitrium patens
PRCOL_00001529 Prasinoderma coloniale
Prupe.8G211200 Prunus persica
Psat6g111240 Pisum sativum
PSO063G6553 Papaver somniferum
QL09p042950 Quercus lobata
QL09p042955 Quercus lobata
RcHm_v2.0_Chr6g0285911 Rosa chinensis
Rhsim01G0137400 Rhododendron simsii
Rhsim07G0034300 Rhododendron simsii
Sabra02G0109800 Salix brachista
Sabra14G0040300 Salix brachista
SalBow5G2512 Salvia bowleyana
SalBow5G5418 Salvia bowleyana
Sc14g0006170 Simmondsia chinensis
Sed0026275 Sechium edule
SEGI_20492 Sequoiadendron giganteum
SEGI_35105 Sequoiadendron giganteum
SGA_v2.0_scaffold116G32305 Striga asiatica
SGA_v2.0_scaffold44G16622 Striga asiatica
SHI13602 Sapria himalayana
SMO201G0136 Selaginella moellendorffii
Solyc08g081430.3 Solanum lycopersicum
Sopen08g029750 Solanum pennellii
Sp6g00070 Schrenkiella parvula
TAR375G0575 Trochodendron aralioides
THA.LOC104814072 Tarenaya hassleriana
Thecc.01G389600 Theobroma cacao
Thhalv10028875m.g Eutrema salsugineum
TPR.G8872 Trifolium pratense
TWI59G1399 Tripterygium wilfordii
unitig_0.g2761 Utricularia gibba
vmacro13481 Vaccinium macrocarpon
vmacro21047 Vaccinium macrocarpon
VMungo0720G0088 Vigna mungo
Zm00001eb010980 Zea mays

User provided reference genes

Program Settings