Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p14640 Brassica napus
A03p54290 Brassica napus
Aa31LG6G6630 Aethionema arabicum
Actinidia01993 Actinidia chinensis
Ah.07g196380 Amaranthus hybridus
AL7G30020 Arabidopsis lyrata
Aqoxy1G00548 Aquilegia oxysepala
Aqoxy7G00267 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3CTT0B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6I5Y8L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E5IT1X Arachis hypogaea
AT4G23440 Arabidopsis thaliana
ATR0680G256 Amborella trichopoda
Atru.BG.189.p Acer truncatum
AUR62010703 Chenopodium quinoa
AUR62017182 Chenopodium quinoa
BcaNung00971 Brassica carinata
BcaNung01440 Brassica carinata
BolC1t01741H Brassica oleracea
BolC7t45768H Brassica oleracea
BraA01t01404Z Brassica rapa
BraA03t14491Z Brassica rapa
C01p18140 Brassica napus
C03p30150 Brassica napus
C07p52670 Brassica napus
C08p25610 Brassica napus
CAN.G532.1 Capsicum annuum
CANSAT21G0111 Cannabis sativa
CARHR230770 Cardamine hirsuta
Carub.0007s1763 Capsella rubella
Ca_17514_v3 Cicer arietinum L.
Ca_24548_v3 Cicer arietinum L.
Cc08_g14930 Coffea canephora
CDE10G0675 Ceratophyllum demersum
Cfa012209 Carpinus fangiana
Ciclev10018685m.g Citrus clementina
CiPaw.11G133200 Carya illinoinensis
ClCG01G002570 Citrullus lanatus
COL.COLO4_34212 Corchorus olitorius
Cpa.g.sc214.13 Carica papaya
CsaV3_5G002670 Cucumis sativus L.
CSS0029765 Camellia sinensis var. sinensis
CSS0033474 Camellia sinensis var. sinensis
CSS0046375 Camellia sinensis var. sinensis
DCAR_008370 Daucus carota
Dinv37624 Davidia involucrata
Duzib106G2040 Durio zibethinus
Duzib114G0014 Durio zibethinus
Duzib128G1887 Durio zibethinus
ECA233G1635 Erigeron canadensis
EL10Ac5g12796 Beta vulgaris
Eucgr.D01831 Eucalyptus grandis
FAN04G1337 Fragaria x ananassa
FAN08G0637 Fragaria x ananassa
FAN18G4077 Fragaria x ananassa
FvH4_5g02740 Fragaria vesca
Glyma.01G220900 Glycine max
Glyma.05G209250 Glycine max
Glyma.05G209300 Glycine max
Glyma.08G016000 Glycine max
Glyma.11G022700 Glycine max
Gohir.A05G292900 Gossypium hirsutum
Gohir.A05G411100 Gossypium hirsutum
Gohir.A10G202500 Gossypium hirsutum
Gohir.D04G004900 Gossypium hirsutum
Gohir.D05G293700 Gossypium hirsutum
Gohir.D10G210700 Gossypium hirsutum
Gorai.009G310300 Gossypium raimondii
Gorai.011G236200 Gossypium raimondii
Gorai.012G006200 Gossypium raimondii
GSVIVG01029435001 Vitis vinifera
HanXRQChr10g0309131 Helianthus annuus
HanXRQChr13g0394521 Helianthus annuus
Haze_08802 Corylus avellana
HPP92_008413 Vanilla planifolia
HPP92_013943 Vanilla planifolia
Hund14828 Selenicereus undatus
Lalb_Chr05g0224641 Lupinus albus
Lalb_Chr09g0320951 Lupinus albus
Lalb_Chr16g0390111 Lupinus albus
Lj2A183T64 Lonicera japonica
Lj4g0009407 Lotus japonicus
LjContig00312_ERROPOS870357g0000119 Lotus japonicus
Lsat_1_v5_gn_6_5340 Lactuca sativa
Manes.02G021100 Manihot esculenta
Mapoly0134s0035 Marchantia polymorpha
MD06G1086700 Malus domestica
MD14G1107900 Malus domestica
Medtr8g098575 Medicago truncatula
MELO3C005690.2 Cucumis melo
Migut.A00741 Erythranthe guttata
Migut.E01078 Erythranthe guttata
MSTRG.13848 Avicennia marina
MSTRG.25622 Avicennia marina
Nitab4.5_0001522g0130 Nicotiana tabacum
Nitab4.5_0002975g0010 Nicotiana tabacum
Nn1g01575 Nelumbo nucifera
Oeu011039.5 Olea europaea
Oeu042333.1 Olea europaea
Os01g0760400 Oryza sativa ssp. japonica
Peaxi162Scf00074g02011 Petunia axillaris
PGR031G0858 Punica granatum
PGSC0003DMG400012335 Solanum tuberosum
Phvul.002G158300 Phaseolus vulgaris
Phvul.002G291100 Phaseolus vulgaris
Potri.003G129600 Populus trichocarpa
Pp3c17_15630 Physcomitrium patens
Pp3c1_30350 Physcomitrium patens
Pp3c2_11110 Physcomitrium patens
Prupe.5G103200 Prunus persica
Psat7g031760 Pisum sativum
PSO478G0747 Papaver somniferum
PSO782G1050 Papaver somniferum
QL12p032531 Quercus lobata
RcHm_v2.0_Chr7g0197191 Rosa chinensis
Rhsim02G0233200 Rhododendron simsii
Rhsim07G0088900 Rhododendron simsii
RhsimUnG0160100 Rhododendron simsii
Sabra03G0092100 Salix brachista
SalBow1G1233 Salvia bowleyana
Sc22g0005550 Simmondsia chinensis
Sed0020631 Sechium edule
SEGI_33325 Sequoiadendron giganteum
SEGI_41212 Sequoiadendron giganteum
SGA_v2.0_scaffold48G18082 Striga asiatica
SHI07170 Sapria himalayana
Solyc08g081260.1 Solanum lycopersicum
Sopen08g029570 Solanum pennellii
Sp7g21340 Schrenkiella parvula
TAR374G1581 Trochodendron aralioides
TAR375G0570 Trochodendron aralioides
TAR629G3360 Trochodendron aralioides
THA.LOC104814630 Tarenaya hassleriana
Thecc.10G083600 Theobroma cacao
Thhalv10024327m.g Eutrema salsugineum
TPR.G12884 Trifolium pratense
TWI60G0569 Tripterygium wilfordii
unitig_88.g27618 Utricularia gibba
VMungo0251G0364 Vigna mungo
VMungo1215G1453 Vigna mungo
VMungo1215G2473 Vigna mungo
Zm00001eb202940 Zea mays

User provided reference genes

Program Settings