Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p12920 Brassica napus
Aa31sc221G80 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2021 Anthoceros agrestis
Actinidia26198 Actinidia chinensis
Ah.02g128460 Amaranthus hybridus
Ah.03g136750 Amaranthus hybridus
AL8G23790 Arabidopsis lyrata
Aqoxy6G00020 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.AGW9EK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M3HJLJ Arachis hypogaea
AT5G49820 Arabidopsis thaliana
ATR1089G008 Amborella trichopoda
Atru.chr6.213 Acer truncatum
AUR62040128 Chenopodium quinoa
AUR62042961 Chenopodium quinoa
AUR62042962 Chenopodium quinoa
BcaB01g02869 Brassica carinata
BcaB05g24065 Brassica carinata
BcaC03g14664 Brassica carinata
BolC2t08242H Brassica oleracea
BraA02t06346Z Brassica rapa
C02p20990 Brassica napus
CAN.G168.25 Capsicum annuum
CANSAT01G1907 Cannabis sativa
CARHR258950 Cardamine hirsuta
Carub.0008s0970 Capsella rubella
Ca_13527_v3 Cicer arietinum L.
Cc02_g23720 Coffea canephora
CDE07G1618 Ceratophyllum demersum
Cfa004434 Carpinus fangiana
Ciclev10000869m.g Citrus clementina
CiPaw.05G001300 Carya illinoinensis
ClCG05G014590 Citrullus lanatus
ClCG10G007490 Citrullus lanatus
ClCG10G007500 Citrullus lanatus
COL.COLO4_31117 Corchorus olitorius
Cpa.g.sc173.6 Carica papaya
Cre12.g560250 Chlamydomonas reinhardtii
CsaV3_3G006710 Cucumis sativus L.
CSS0014792 Camellia sinensis var. sinensis
CSS0017136 Camellia sinensis var. sinensis
CSS0020429 Camellia sinensis var. sinensis
CSS0022296 Camellia sinensis var. sinensis
CSS0022931 Camellia sinensis var. sinensis
CSS0027899 Camellia sinensis var. sinensis
Dinv20865 Davidia involucrata
Dinv29637 Davidia involucrata
Dinv29681 Davidia involucrata
Duzib160G0234 Durio zibethinus
Duzib192G0835 Durio zibethinus
ECA238G2920 Erigeron canadensis
EL10Ac6g13971 Beta vulgaris
EL10Ac9g20889 Beta vulgaris
Eucgr.G00067 Eucalyptus grandis
FAN04G1883 Fragaria x ananassa
FAN08G1447 Fragaria x ananassa
FAN13G2899 Fragaria x ananassa
FAN18G0084 Fragaria x ananassa
FvH4_5g27690 Fragaria vesca
Glyma.07G272200 Glycine max
Glyma.17G002100 Glycine max
Gohir.A03G081200 Gossypium hirsutum
Gohir.D02G105400 Gossypium hirsutum
Gorai.005G119600 Gossypium raimondii
GSVIVG01023138001 Vitis vinifera
HanXRQChr09g0248771 Helianthus annuus
Haze_09974 Corylus avellana
Hma1.2p1_0157F.1_g069140 Hydrangea macrophylla
HPP92_019419 Vanilla planifolia
Lalb_Chr12g0195871 Lupinus albus
Lj4g0019033 Lotus japonicus
Lj5A285T49 Lonicera japonica
Lj9A259T47 Lonicera japonica
Lsat_1_v5_gn_9_124960 Lactuca sativa
Manes.07G030900 Manihot esculenta
Manes.10G106100 Manihot esculenta
Mapoly0083s0024 Marchantia polymorpha
MBI03_g34265_MAGBIO Magnolia biondii
MBI06_g43030_MAGBIO Magnolia biondii
MD08G1248500 Malus domestica
MD15G1443300 Malus domestica
Medtr4g077650 Medicago truncatula
Medtr4g134590 Medicago truncatula
MELO3C016450.2 Cucumis melo
Migut.B00717 Erythranthe guttata
MSTRG.27881 Avicennia marina
Nitab4.5_0000460g0050 Nicotiana tabacum
Nitab4.5_0010848g0010 Nicotiana tabacum
Nn5g27149 Nelumbo nucifera
Oeu016640.1 Olea europaea
Os01g0886900 Oryza sativa ssp. japonica
Peaxi162Scf00000g00067 Petunia axillaris
Peaxi162Scf00071g00002 Petunia axillaris
PGR042G0050 Punica granatum
PGSC0003DMG400021663 Solanum tuberosum
Phvul.003G091200 Phaseolus vulgaris
Potri.004G229500 Populus trichocarpa
Pp3c5_3000 Physcomitrium patens
Pp3c6_25980 Physcomitrium patens
Prupe.1G585900 Prunus persica
Psat4g002680 Pisum sativum
PSO210G3878 Papaver somniferum
PSO447G0115 Papaver somniferum
QL02p065019 Quercus lobata
QL02p103548 Quercus lobata
QL12p020365 Quercus lobata
RcHm_v2.0_Chr7g0219391 Rosa chinensis
Rhsim01G0139900 Rhododendron simsii
Rhsim05G0115000 Rhododendron simsii
Sabra01G0174700 Salix brachista
Sc03g0005760 Simmondsia chinensis
Sed0020041 Sechium edule
Sed0026062 Sechium edule
SEGI_34248 Sequoiadendron giganteum
SEGI_38877 Sequoiadendron giganteum
SGA_v2.0_scaffold131G34422 Striga asiatica
SGA_v2.0_scaffold131G34423 Striga asiatica
SGA_v2.0_scaffold254G45234 Striga asiatica
SHI04994 Sapria himalayana
SMO351G0153 Selaginella moellendorffii
Solyc10g008560.3 Solanum lycopersicum
Sopen10g004370 Solanum pennellii
Sp6g11260 Schrenkiella parvula
Sp6g11270 Schrenkiella parvula
TAR381G0422 Trochodendron aralioides
TAR381G1352 Trochodendron aralioides
TAR628G0417 Trochodendron aralioides
TAR628G0856 Trochodendron aralioides
THA.LOC104809044 Tarenaya hassleriana
THA.LOC104824539 Tarenaya hassleriana
Thecc.06G020000 Theobroma cacao
Thhalv10013323m.g Eutrema salsugineum
TPR.G5983 Trifolium pratense
TWI59G0552 Tripterygium wilfordii
unitig_26.g9009 Utricularia gibba
unitig_749.g14114 Utricularia gibba
vmacro19825 Vaccinium macrocarpon
VMungo1215G1402 Vigna mungo
Zm00001eb145400 Zea mays
Zm00001eb288290 Zea mays
Zm00001eb349160 Zea mays
Zm00001eb365980 Zea mays

User provided reference genes

Program Settings