Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p44110 Brassica napus
Aa31LG4G19130 Aethionema arabicum
Actinidia26105 Actinidia chinensis
Ah.08g209860 Amaranthus hybridus
AL5G31430 Arabidopsis lyrata
Aqoxy6G01210 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.I9PPQ0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IV76VY Arachis hypogaea
AT3G51010 Arabidopsis thaliana
ATR0605G129 Amborella trichopoda
AUR62012893 Chenopodium quinoa
AUR62027117 Chenopodium quinoa
BcaB01g00554 Brassica carinata
BcaC06g33063 Brassica carinata
BcaC07g39579 Brassica carinata
BcaNung00403 Brassica carinata
BolC8t50249H Brassica oleracea
BraA09t39870Z Brassica rapa
C08p26310 Brassica napus
CAN.G419.11 Capsicum annuum
CAN.G419.13 Capsicum annuum
CANSAT01G3286 Cannabis sativa
CARHR160580 Cardamine hirsuta
CARHR160590 Cardamine hirsuta
Carub.0005s1741 Capsella rubella
Ca_14022_v3 Cicer arietinum L.
Cc07_g10180 Coffea canephora
CDE04G0601 Ceratophyllum demersum
CDE12G0226 Ceratophyllum demersum
Cfa006918 Carpinus fangiana
Ciclev10003765m.g Citrus clementina
CiPaw.08G137200 Carya illinoinensis
ClCG09G019610 Citrullus lanatus
COL.COLO4_21992 Corchorus olitorius
Cpa.g.sc217.22 Carica papaya
CsaV3_5G027780 Cucumis sativus L.
CSS0048601 Camellia sinensis var. sinensis
DCAR_025978 Daucus carota
Dinv33575 Davidia involucrata
Dinv33576 Davidia involucrata
ECA248G0981 Erigeron canadensis
EL10Ac9g22080 Beta vulgaris
Eucgr.H02778 Eucalyptus grandis
FAN07G1349 Fragaria x ananassa
FAN12G4326 Fragaria x ananassa
FAN15G1271 Fragaria x ananassa
FAN17G0825 Fragaria x ananassa
FAN20G0529 Fragaria x ananassa
FAN22G0080 Fragaria x ananassa
FAN24G1434 Fragaria x ananassa
FAN24G2610 Fragaria x ananassa
FvH4_2g15150 Fragaria vesca
FvH4_4g16440 Fragaria vesca
Glyma.13G002400 Glycine max
Glyma.16G220800 Glycine max
Glyma.20G066700 Glycine max
Gohir.A11G179400 Gossypium hirsutum
Gohir.D11G187100 Gossypium hirsutum
Gorai.007G199000 Gossypium raimondii
GSVIVG01018856001 Vitis vinifera
HanXRQChr10g0278901 Helianthus annuus
Haze_03832 Corylus avellana
Hma1.2p1_1114F.1_g258780 Hydrangea macrophylla
HPP92_013005 Vanilla planifolia
Hund00373 Selenicereus undatus
Lalb_Chr02g0154671 Lupinus albus
Lalb_Chr06g0172541 Lupinus albus
Lj2A460T79 Lonicera japonica
Lj3g0016616 Lotus japonicus
Lj4A211T64 Lonicera japonica
Lj5g0021075 Lotus japonicus
Lsat_1_v5_gn_9_115780 Lactuca sativa
Manes.01G140500 Manihot esculenta
Manes.02G099200 Manihot esculenta
MBI01_g11791_MAGBIO Magnolia biondii
MBI01_g45163_MAGBIO Magnolia biondii
MD05G1010700 Malus domestica
MD10G1009400 Malus domestica
Medtr8g077440 Medicago truncatula
MELO3C005244.2 Cucumis melo
Migut.H02503 Erythranthe guttata
MSTRG.23266 Avicennia marina
Nitab4.5_0002707g0030 Nicotiana tabacum
Nitab4.5_0007445g0010 Nicotiana tabacum
Nn1g05784 Nelumbo nucifera
Nn5g29728 Nelumbo nucifera
Oeu021744.2 Olea europaea
Oeu035320.1 Olea europaea
Os05g0126200 Oryza sativa ssp. japonica
Peaxi162Scf00329g00119 Petunia axillaris
PGR119G1083 Punica granatum
PGSC0003DMG400025306 Solanum tuberosum
Phvul.010G058900 Phaseolus vulgaris
Potri.007G018300 Populus trichocarpa
Prupe.8G013400 Prunus persica
Psat0s439g0080 Pisum sativum
Psat2g190960 Pisum sativum
PSO170G2173 Papaver somniferum
PSO339G4156 Papaver somniferum
PSO528G0264 Papaver somniferum
QL06p034798 Quercus lobata
QL08p063081 Quercus lobata
QL10p007390 Quercus lobata
RcHm_v2.0_Chr6g0277811 Rosa chinensis
Rhsim08G0123600 Rhododendron simsii
Sabra07G0015400 Salix brachista
SalBow8G3171 Salvia bowleyana
Sc18g0007030 Simmondsia chinensis
Sed0001903 Sechium edule
Sed0005955 Sechium edule
SEGI_21166 Sequoiadendron giganteum
SGA_v2.0_scaffold280G46859 Striga asiatica
SGA_v2.0_scaffold9G04932 Striga asiatica
SHI00863 Sapria himalayana
SHI03481 Sapria himalayana
SHI05467 Sapria himalayana
SHI06070 Sapria himalayana
SHI10625 Sapria himalayana
SHI13147 Sapria himalayana
SHI15307 Sapria himalayana
SHI23837 Sapria himalayana
SHI26700 Sapria himalayana
SHI27568 Sapria himalayana
SHI37806 Sapria himalayana
Solyc04g008800.3 Solanum lycopersicum
Sopen04g003980 Solanum pennellii
Sp5g11200 Schrenkiella parvula
TAR381G0206 Trochodendron aralioides
THA.LOC104819191 Tarenaya hassleriana
Thecc.01G026300 Theobroma cacao
Thhalv10010748m.g Eutrema salsugineum
TPR.G24134 Trifolium pratense
TWI09G1445 Tripterygium wilfordii
TWI60G0108 Tripterygium wilfordii
unitig_747.g21954 Utricularia gibba
VMungo0331G0515 Vigna mungo
Zm00001eb035810 Zea mays
Zm00001eb093520 Zea mays
Zm00001eb265250 Zea mays
Zm00001eb309330 Zea mays
Zm00001eb355020 Zea mays
Zm00001eb372850 Zea mays
Zm00001eb414250 Zea mays

User provided reference genes

Program Settings