Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p64680 Brassica napus
Aa31LG1G4050 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2184 Anthoceros agrestis
Ah.03g138120 Amaranthus hybridus
AL1G21710 Arabidopsis lyrata
Aqoxy5G02275 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3FYK03 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8TZ9EP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.94J17Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B308TG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BYQ4G2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E0G9L5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F717DE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HDLM7U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HK0KDN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X0Q2J1 Arachis hypogaea
AT1G10780 Arabidopsis thaliana
ATR0193G009 Amborella trichopoda
Atru.chr6.646 Acer truncatum
AUR62002965 Chenopodium quinoa
AUR62007773 Chenopodium quinoa
BcaC05g24954 Brassica carinata
BolC8t52390H Brassica oleracea
BraA09t41824Z Brassica rapa
C08p48500 Brassica napus
CAN.G1577.14 Capsicum annuum
CANSAT11G0924 Cannabis sativa
CANSAT11G2649 Cannabis sativa
CARHR011000 Cardamine hirsuta
Carub.0001s1033 Capsella rubella
Ca_00078_v3 Cicer arietinum L.
Cc02_g22460 Coffea canephora
CDE11G1073 Ceratophyllum demersum
Cfa005525 Carpinus fangiana
Ciclev10001293m.g Citrus clementina
CiPaw.05G044000 Carya illinoinensis
CiPaw.06G147600 Carya illinoinensis
ClCG09G014240 Citrullus lanatus
COL.COLO4_17869 Corchorus olitorius
Cpa.g.sc113.63 Carica papaya
CsaV3_6G037270 Cucumis sativus L.
CSS0002632 Camellia sinensis var. sinensis
CSS0043414 Camellia sinensis var. sinensis
DCAR_013987 Daucus carota
DCAR_031890 Daucus carota
Dinv19364 Davidia involucrata
Dinv24276 Davidia involucrata
Dinv24279 Davidia involucrata
Duzib052G1228 Durio zibethinus
ECA234G2063 Erigeron canadensis
ECA236G4790 Erigeron canadensis
EL10Ac6g14556 Beta vulgaris
Eucgr.I02722 Eucalyptus grandis
FAN08G1144 Fragaria x ananassa
FAN13G1157 Fragaria x ananassa
FAN17G2978 Fragaria x ananassa
FAN18G3183 Fragaria x ananassa
FvH4_5g29550 Fragaria vesca
Glyma.05G169600 Glycine max
Glyma.08G127900 Glycine max
Glyma.08G185900 Glycine max
Glyma.15G046900 Glycine max
Gohir.A01G178400 Gossypium hirsutum
Gohir.A12G031900 Gossypium hirsutum
Gohir.D01G169300 Gossypium hirsutum
Gohir.D12G040400 Gossypium hirsutum
Gorai.002G210900 Gossypium raimondii
Gorai.008G042100 Gossypium raimondii
GSVIVG01022967001 Vitis vinifera
HanXRQChr06g0169581 Helianthus annuus
HanXRQChr10g0289981 Helianthus annuus
HanXRQChr16g0514561 Helianthus annuus
Haze_01666 Corylus avellana
Hma1.2p1_0217F.1_g092010 Hydrangea macrophylla
HPP92_010977 Vanilla planifolia
HPP92_016716 Vanilla planifolia
Hund05788 Selenicereus undatus
Lalb_Chr07g0185731 Lupinus albus
Lalb_Chr20g0123431 Lupinus albus
Lj4g0002358 Lotus japonicus
Lj5A252T45 Lonicera japonica
Lj6g0011599 Lotus japonicus
Lsat_1_v5_gn_4_48740 Lactuca sativa
Lsat_1_v5_gn_5_109981 Lactuca sativa
Manes.07G015400 Manihot esculenta
Mapoly0113s0005 Marchantia polymorpha
MBI06_g20718_MAGBIO Magnolia biondii
MD08G1228700 Malus domestica
MD15G1422700 Malus domestica
Medtr2g007220 Medicago truncatula
MELO3C014388.2 Cucumis melo
Migut.N01041 Erythranthe guttata
MSTRG.27843 Avicennia marina
MSTRG.5231 Avicennia marina
Nitab4.5_0002245g0060 Nicotiana tabacum
Nitab4.5_0007420g0030 Nicotiana tabacum
Nn1g08733 Nelumbo nucifera
Nn5g28206 Nelumbo nucifera
Oeu008891.1 Olea europaea
Oeu033126.1 Olea europaea
Oeu056678.1 Olea europaea
Os08g0469500 Oryza sativa ssp. japonica
Os09g0454300 Oryza sativa ssp. japonica
Peaxi162Scf00011g00352 Petunia axillaris
PGR042G0198 Punica granatum
PGSC0003DMG400023758 Solanum tuberosum
Phvul.002G250300 Phaseolus vulgaris
Phvul.006G214300 Phaseolus vulgaris
Potri.001G210800 Populus trichocarpa
Potri.003G019400 Populus trichocarpa
Prupe.1G568000 Prunus persica
Psat2g122240 Pisum sativum
QL08p043348 Quercus lobata
RcHm_v2.0_Chr7g0222501 Rosa chinensis
Rhsim11G0129700 Rhododendron simsii
Sabra01G0162800 Salix brachista
Sabra03G0010900 Salix brachista
SalBow6G6401 Salvia bowleyana
Sc16g0001650 Simmondsia chinensis
Sed0010360 Sechium edule
Sed0018525 Sechium edule
SGA_v2.0_scaffold292G47368 Striga asiatica
SMO169G0280 Selaginella moellendorffii
Solyc01g104230.4 Solanum lycopersicum
Sopen01g046670 Solanum pennellii
Sp1g09480 Schrenkiella parvula
TAR376G0200 Trochodendron aralioides
TAR628G1654 Trochodendron aralioides
THA.LOC104809588 Tarenaya hassleriana
THA.LOC104819321 Tarenaya hassleriana
Thecc.02G038500 Theobroma cacao
Thecc.02G038700 Theobroma cacao
Thhalv10007703m.g Eutrema salsugineum
TPR.G2126 Trifolium pratense
TWI14G1253 Tripterygium wilfordii
TWI23G0911 Tripterygium wilfordii
unitig_26.g9020 Utricularia gibba
vmacro01763 Vaccinium macrocarpon
VMungo0251G3193 Vigna mungo
VMungo0540G0616 Vigna mungo
Zm00001eb037840 Zea mays
Zm00001eb100430 Zea mays
Zm00001eb176520 Zea mays

User provided reference genes

Program Settings