Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p06870 Brassica napus
A08p18630 Brassica napus
Aa31LG2G18940 Aethionema arabicum
Actinidia06422 Actinidia chinensis
Ah.10g033740 Amaranthus hybridus
AL7G20650 Arabidopsis lyrata
Aqoxy7G02368 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.FYF4Q1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VY3H9B Arachis hypogaea
AT4G31410 Arabidopsis thaliana
ATR0368G002 Amborella trichopoda
Atru.chr7.2630 Acer truncatum
AUR62009048 Chenopodium quinoa
AUR62009049 Chenopodium quinoa
AUR62020614 Chenopodium quinoa
AUR62044508 Chenopodium quinoa
AUR62044573 Chenopodium quinoa
BcaB03g12692 Brassica carinata
BcaB03g12694 Brassica carinata
BcaC01g01090 Brassica carinata
BcaC09g51920 Brassica carinata
BcaNung04591 Brassica carinata
BolC1t00744H Brassica oleracea
BolC3t21110H Brassica oleracea
BraA01t00638Z Brassica rapa
BraA08t33826Z Brassica rapa
C01p07640 Brassica napus
C03p87990 Brassica napus
CAN.G566.60 Capsicum annuum
CANSAT25G1153 Cannabis sativa
CARHR239290 Cardamine hirsuta
Carub.0007s0915 Capsella rubella
Ca_12872_v3 Cicer arietinum L.
Cc00_g03650 Coffea canephora
CDE02G3467 Ceratophyllum demersum
CDE04G3604 Ceratophyllum demersum
Cfa013260 Carpinus fangiana
Ciclev10008890m.g Citrus clementina
CiPaw.07G213800 Carya illinoinensis
CiPaw.08G019000 Carya illinoinensis
ClCG08G012720 Citrullus lanatus
COL.COLO4_19044 Corchorus olitorius
Cpa.g.sc23.3 Carica papaya
CsaV3_2G031450 Cucumis sativus L.
CSS0040231 Camellia sinensis var. sinensis
DCAR_000670 Daucus carota
Dinv03490 Davidia involucrata
Duzib150G1600 Durio zibethinus
Duzib168G2186 Durio zibethinus
ECA240G1090 Erigeron canadensis
EL10Ac2g03736 Beta vulgaris
Eucgr.C02094 Eucalyptus grandis
FAN15G0145 Fragaria x ananassa
FAN20G1887 Fragaria x ananassa
FAN27G3138 Fragaria x ananassa
FvH4_2g36920 Fragaria vesca
Glyma.06G075800 Glycine max
Glyma.11G173028 Glycine max
Glyma.14G133700 Glycine max
Glyma.17G189500 Glycine max
Glyma.17G200301 Glycine max
Gohir.A06G106300 Gossypium hirsutum
Gohir.A07G001300 Gossypium hirsutum
Gohir.D06G108500 Gossypium hirsutum
Gohir.D07G001700 Gossypium hirsutum
Gorai.001G001400 Gossypium raimondii
Gorai.010G123200 Gossypium raimondii
GSVIVG01035535001 Vitis vinifera
HanXRQChr03g0081261 Helianthus annuus
HanXRQChr13g0411861 Helianthus annuus
Haze_21720 Corylus avellana
Hma1.2p1_0379F.1_g139810 Hydrangea macrophylla
HPP92_010464 Vanilla planifolia
HPP92_018567 Vanilla planifolia
Hund03283 Selenicereus undatus
Lalb_Chr08g0243611 Lupinus albus
Lalb_Chr11g0064101 Lupinus albus
Lj1g0020250 Lotus japonicus
Lj5g0003100 Lotus japonicus
Lj7P752T43 Lonicera japonica
Lsat_1_v5_gn_5_56541 Lactuca sativa
Manes.03G003100 Manihot esculenta
MBI14_g17382_MAGBIO Magnolia biondii
MBI16_g31784_MAGBIO Magnolia biondii
MD08G1131200 Malus domestica
MD15G1108900 Malus domestica
Medtr1g009790 Medicago truncatula
MELO3C011194.2 Cucumis melo
Migut.A00440 Erythranthe guttata
MSTRG.11812 Avicennia marina
MSTRG.13942 Avicennia marina
MSTRG.25775 Avicennia marina
Nitab4.5_0000668g0050 Nicotiana tabacum
Nitab4.5_0001110g0190 Nicotiana tabacum
Nn8g40613 Nelumbo nucifera
Oeu047999.1 Olea europaea
Os02g0150900 Oryza sativa ssp. japonica
Os06g0693700 Oryza sativa ssp. japonica
Peaxi162Scf00459g00836 Petunia axillaris
PGR044G2643 Punica granatum
PGSC0003DMG400029366 Solanum tuberosum
Phvul.001G058700 Phaseolus vulgaris
Phvul.009G100500 Phaseolus vulgaris
Potri.006G275400 Populus trichocarpa
Potri.018G006400 Populus trichocarpa
Prupe.1G461100 Prunus persica
Psat6g007600 Pisum sativum
PSO017G5514 Papaver somniferum
PSO170G6474 Papaver somniferum
QL12p024933 Quercus lobata
RcHm_v2.0_Chr6g0304861 Rosa chinensis
Rhsim07G0170600 Rhododendron simsii
Sabra06G0213200 Salix brachista
Sabra18G0014400 Salix brachista
SalBow4G3319 Salvia bowleyana
SalBow8G2789 Salvia bowleyana
Sc09g0008050 Simmondsia chinensis
Sed0000185 Sechium edule
Sed0024873 Sechium edule
SGA_v2.0_scaffold193G40659 Striga asiatica
SGA_v2.0_scaffold27G11670 Striga asiatica
Solyc12g096460.3 Solanum lycopersicum
Sopen12g032290 Solanum pennellii
Sp7g29270 Schrenkiella parvula
TAR636G1446 Trochodendron aralioides
TAR636G3556 Trochodendron aralioides
THA.LOC104803596 Tarenaya hassleriana
Thecc.09G006200 Theobroma cacao
Thhalv10025953m.g Eutrema salsugineum
TPR.G12103 Trifolium pratense
TWI32G0328 Tripterygium wilfordii
TWI34G1558 Tripterygium wilfordii
unitig_0.g2191 Utricularia gibba
unitig_32.g11645 Utricularia gibba
unitig_747.g21380 Utricularia gibba
unitig_748.g7382 Utricularia gibba
vmacro05101 Vaccinium macrocarpon
VMungo0647G0545 Vigna mungo
VMungo1309G1204 Vigna mungo
Zm00001eb207970 Zea mays
Zm00001eb226240 Zea mays
Zm00001eb270870 Zea mays
Zm00001eb273300 Zea mays

User provided reference genes

Program Settings