Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p05130 Brassica napus
A09p10810 Brassica napus
Aa31LG8G13280 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.307 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.432 Anthoceros agrestis
Actinidia00438 Actinidia chinensis
Ah.04g164910 Amaranthus hybridus
Ah.06g184040 Amaranthus hybridus
AL3G47370 Arabidopsis lyrata
Aqoxy6G01317 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.AXQD4Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X7K798 Arachis hypogaea
AT2G15620 Arabidopsis thaliana
ATR0009G021 Amborella trichopoda
Atru.chr5.2694 Acer truncatum
AUR62029383 Chenopodium quinoa
AUR62034289 Chenopodium quinoa
BcaB03g16309 Brassica carinata
BcaB07g31785 Brassica carinata
BcaC04g23041 Brassica carinata
BcaC04g23043 Brassica carinata
BcaC06g36073 Brassica carinata
BolC7t41235H Brassica oleracea
BolC9t54165H Brassica oleracea
BraA07t28307Z Brassica rapa
BraA09t36723Z Brassica rapa
C07p08190 Brassica napus
C09p12780 Brassica napus
CAN.G1041.10 Capsicum annuum
CAN.G149.20 Capsicum annuum
CAN.G663.4 Capsicum annuum
CANSAT25G2295 Cannabis sativa
CARHR105960 Cardamine hirsuta
Carub.0003s2939 Capsella rubella
Ca_18688_v3 Cicer arietinum L.
CBR_g49893 Chara braunii
Cc02_g28520 Coffea canephora
CDE09G0425 Ceratophyllum demersum
Cfa004525 Carpinus fangiana
Cfa021071 Carpinus fangiana
Ciclev10028067m.g Citrus clementina
CiPaw.05G006800 Carya illinoinensis
CiPaw.06G172200 Carya illinoinensis
ClCG05G009960 Citrullus lanatus
COL.COLO4_32650 Corchorus olitorius
Cpa.g.sc62.8 Carica papaya
Cre09.g410750 Chlamydomonas reinhardtii
CsaV3_3G018610 Cucumis sativus L.
CSS0038145 Camellia sinensis var. sinensis
DCAR_029058 Daucus carota
Dinv42160 Davidia involucrata
Duzib248G0136 Durio zibethinus
ECA236G3626 Erigeron canadensis
EL10Ac4g08164 Beta vulgaris
Eucgr.I01148 Eucalyptus grandis
FAN24G3555 Fragaria x ananassa
FAN27G2168 Fragaria x ananassa
FvH4_2g05960 Fragaria vesca
Glyma.02G132100 Glycine max
Glyma.07G212800 Glycine max
Gohir.A13G040600 Gossypium hirsutum
Gohir.D13G039300 Gossypium hirsutum
Gorai.013G044200 Gossypium raimondii
GSVIVG01031737001 Vitis vinifera
HanXRQChr04g0128191 Helianthus annuus
HanXRQChr09g0259251 Helianthus annuus
Haze_10084 Corylus avellana
Hma1.2p1_0370F.1_g137745 Hydrangea macrophylla
HPP92_004223 Vanilla planifolia
HPP92_004227 Vanilla planifolia
Hund02212 Selenicereus undatus
Hund22922 Selenicereus undatus
Lalb_Chr05g0219191 Lupinus albus
Lj4g0002152 Lotus japonicus
Lj5A209T83 Lonicera japonica
Lsat_1_v5_gn_7_86961 Lactuca sativa
Lsat_1_v5_gn_7_86981 Lactuca sativa
Manes.10G071700 Manihot esculenta
Mapoly0183s0004 Marchantia polymorpha
MBI03_g13466_MAGBIO Magnolia biondii
MCO01G555 Micromonas commoda
MD05G1081500 Malus domestica
Medtr4g086020 Medicago truncatula
MELO3C019505.2 Cucumis melo
Migut.B00351 Erythranthe guttata
MSTRG.16738 Avicennia marina
Nitab4.5_0000876g0100 Nicotiana tabacum
Nitab4.5_0001401g0020 Nicotiana tabacum
Nitab4.5_0001401g0030 Nicotiana tabacum
Nitab4.5_0005249g0010 Nicotiana tabacum
Nitab4.5_0018347g0010 Nicotiana tabacum
Nn1g04853 Nelumbo nucifera
Oeu009747.1 Olea europaea
Os01g0357100 Oryza sativa ssp. japonica
Os01g0357500 Oryza sativa ssp. japonica
Os02g0765900 Oryza sativa ssp. japonica
Peaxi162Scf00003g01630 Petunia axillaris
Peaxi162Scf00016g01734 Petunia axillaris
PGR142G1087 Punica granatum
PGSC0003DMG400008262 Solanum tuberosum
PGSC0003DMG400025823 Solanum tuberosum
Phvul.003G292100 Phaseolus vulgaris
Potri.004G140800 Populus trichocarpa
Potri.009G101600 Populus trichocarpa
Pp3c16_15880 Physcomitrium patens
Pp3c27_6610 Physcomitrium patens
Pp3c6_26360 Physcomitrium patens
PRCOL_00004550 Prasinoderma coloniale
Prupe.8G126000 Prunus persica
Psat7g123960 Pisum sativum
PSO170G4054 Papaver somniferum
PSO210G5341 Papaver somniferum
QL11p035712 Quercus lobata
RcHm_v2.0_Chr6g0257431 Rosa chinensis
Rhsim11G0165400 Rhododendron simsii
Sabra04G0092700 Salix brachista
Sabra09G0077500 Salix brachista
Sc18g0004090 Simmondsia chinensis
Sed0000080 Sechium edule
SEGI_39412 Sequoiadendron giganteum
SGA_v2.0_scaffold90G27642 Striga asiatica
SMO200G0071 Selaginella moellendorffii
Solyc01g108630.3 Solanum lycopersicum
Solyc10g050890.2 Solanum lycopersicum
Sopen01g050850 Solanum pennellii
Sopen10g022530 Solanum pennellii
Sp3g28890 Schrenkiella parvula
TAR628G0128 Trochodendron aralioides
TAR628G0481 Trochodendron aralioides
TAR628G1054 Trochodendron aralioides
TAR628G1452 Trochodendron aralioides
TAR628G1596 Trochodendron aralioides
THA.LOC104807271 Tarenaya hassleriana
THA.LOC104819578 Tarenaya hassleriana
Thecc.02G101200 Theobroma cacao
Thhalv10022613m.g Eutrema salsugineum
TPR.G25435 Trifolium pratense
TWI31G0729 Tripterygium wilfordii
unitig_0.g85 Utricularia gibba
vmacro02045 Vaccinium macrocarpon
VMungo0251G0630 Vigna mungo
Zm00001eb193660 Zea mays
Zm00001eb255880 Zea mays

User provided reference genes

Program Settings