Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Aa31LG1G14200 Aethionema arabicum
Aa31LG6G16700 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2915 Anthoceros agrestis
Actinidia20576 Actinidia chinensis
Ah.01g009970 Amaranthus hybridus
AL6G14740 Arabidopsis lyrata
AL7G10160 Arabidopsis lyrata
AL7G13060 Arabidopsis lyrata
Aqoxy5G00999 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.H6WGQ1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z16TJ0 Arachis hypogaea
AT4G38240 Arabidopsis thaliana
ATR0807G110 Amborella trichopoda
ATR0807G194 Amborella trichopoda
Atru.chr5.3533 Acer truncatum
AUR62010173 Chenopodium quinoa
AUR62013174 Chenopodium quinoa
BcaNung01996 Brassica carinata
BNapus_Darmor_BZH_scaffold_146p00070 Brassica napus
BolC7t46794H Brassica oleracea
BraA06t27778Z Brassica rapa
CAN.G1725.1 Capsicum annuum
CAN.G1725.2 Capsicum annuum
CAN.G533.11 Capsicum annuum
CANSAT25G3783 Cannabis sativa
CANSAT78G0806 Cannabis sativa
CARHR294030 Cardamine hirsuta
Carub.0007s0018 Capsella rubella
Ca_15273_v3 Cicer arietinum L.
CBR_g40811 Chara braunii
Cc09_g10810 Coffea canephora
CDE07G0143 Ceratophyllum demersum
CDE07G2075 Ceratophyllum demersum
Cfa005368 Carpinus fangiana
Cfa005369 Carpinus fangiana
Ciclev10028418m.g Citrus clementina
CiPaw.05G093000 Carya illinoinensis
CiPaw.06G115500 Carya illinoinensis
ClCG02G003410 Citrullus lanatus
COL.COLO4_19776 Corchorus olitorius
Cpa.g.c28580 Carica papaya
CsaV3_7G001910 Cucumis sativus L.
CSS0007702 Camellia sinensis var. sinensis
CSS0012413 Camellia sinensis var. sinensis
CSS0021914 Camellia sinensis var. sinensis
CSS0022527 Camellia sinensis var. sinensis
CSS0033501 Camellia sinensis var. sinensis
CSS0046634 Camellia sinensis var. sinensis
DCAR_026076 Daucus carota
Dinv14173 Davidia involucrata
Dinv41871 Davidia involucrata
ECA234G1180 Erigeron canadensis
ECA246G3822 Erigeron canadensis
EL10Ac1g01043 Beta vulgaris
EL10Ac9g21529 Beta vulgaris
Eucgr.H04987 Eucalyptus grandis
Eucgr.H04989 Eucalyptus grandis
Eucgr.L00583 Eucalyptus grandis
Eucgr.L00584 Eucalyptus grandis
FAN15G3115 Fragaria x ananassa
FAN24G3349 Fragaria x ananassa
FAN27G1508 Fragaria x ananassa
FvH4_2g16770 Fragaria vesca
Glyma.04G000400 Glycine max
Glyma.06G000300 Glycine max
Gohir.A12G013200 Gossypium hirsutum
Gohir.D12G014000 Gossypium hirsutum
Gorai.008G014000 Gossypium raimondii
GSVIVG01002028001 Vitis vinifera
GSVIVG01002825001 Vitis vinifera
GSVIVG01002907001 Vitis vinifera
HanXRQChr10g0298431 Helianthus annuus
HanXRQChr15g0476431 Helianthus annuus
HanXRQChr16g0524371 Helianthus annuus
Haze_02001 Corylus avellana
HPP92_004948 Vanilla planifolia
HPP92_022155 Vanilla planifolia
Hund06364 Selenicereus undatus
Lalb_Chr08g0246871 Lupinus albus
Lj1g0021981 Lotus japonicus
Lj5A171G135 Lonicera japonica
Lj5A171G136 Lonicera japonica
Lsat_1_v5_gn_3_48560 Lactuca sativa
Lsat_1_v5_gn_4_71380 Lactuca sativa
Manes.11G110000 Manihot esculenta
Mapoly0041s0049 Marchantia polymorpha
MBI05_g33297_MAGBIO Magnolia biondii
MCO01G683 Micromonas commoda
MCO10G329 Micromonas commoda
MD05G1138700 Malus domestica
MD10G1141600 Malus domestica
Medtr3g118520 Medicago truncatula
Medtr3g118525 Medicago truncatula
MELO3C013249.2 Cucumis melo
Migut.B00006 Erythranthe guttata
MSTRG.19946 Avicennia marina
Nitab4.5_0000783g0090 Nicotiana tabacum
Nitab4.5_0010601g0030 Nicotiana tabacum
Nn6g31681 Nelumbo nucifera
Oeu006117.1 Olea europaea
Os02g0832800 Oryza sativa ssp. japonica
Peaxi162Scf00362g00132 Petunia axillaris
PGR042G0992 Punica granatum
PGSC0003DMG401014680 Solanum tuberosum
PGSC0003DMG402014680 Solanum tuberosum
PGSC0003DMG403014680 Solanum tuberosum
Phvul.009G115600 Phaseolus vulgaris
Potri.004G206900 Populus trichocarpa
Potri.009G168000 Populus trichocarpa
Pp3c12_4490 Physcomitrium patens
Pp3c22_17330 Physcomitrium patens
Prupe.8G179800 Prunus persica
Psat5g000480 Pisum sativum
PSO170G2598 Papaver somniferum
PSO210G4213 Papaver somniferum
QL11p056319 Quercus lobata
QL11p056323 Quercus lobata
RcHm_v2.0_Chr6g0280891 Rosa chinensis
Rhsim11G0198000 Rhododendron simsii
Sabra04G0139200 Salix brachista
Sabra09G0130500 Salix brachista
SalBow1G5214 Salvia bowleyana
Sc18g0005790 Simmondsia chinensis
Sc18g0005820 Simmondsia chinensis
Sed0000358 Sechium edule
Sed0018804 Sechium edule
SEGI_16108 Sequoiadendron giganteum
SGA_v2.0_scaffold399G50809 Striga asiatica
SMO201G0157 Selaginella moellendorffii
Solyc01g112240.4 Solanum lycopersicum
Sopen01g054300 Solanum pennellii
Sp7g37480 Schrenkiella parvula
TAR376G0977 Trochodendron aralioides
TAR628G1330 Trochodendron aralioides
THA.LOC104824732 Tarenaya hassleriana
Thecc.02G146000 Theobroma cacao
Thhalv10025208m.g Eutrema salsugineum
TPR.G38553 Trifolium pratense
TWI75G1664 Tripterygium wilfordii
vmacro02339 Vaccinium macrocarpon
VMungo1309G0298 Vigna mungo
VMungo1309G1049 Vigna mungo
Zm00001eb421090 Zea mays

User provided reference genes

Program Settings