Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p14060 Brassica napus
A03p53780 Brassica napus
Aa31LG6G4860 Aethionema arabicum
Aa31LG6G4870 Aethionema arabicum
Aa31LG6G4880 Aethionema arabicum
Actinidia02074 Actinidia chinensis
Actinidia14478 Actinidia chinensis
Ah.12g058080 Amaranthus hybridus
AL7G30720 Arabidopsis lyrata
Aqoxy7G00596 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2QIE74 Arachis hypogaea
AT4G22790 Arabidopsis thaliana
ATR0810G013 Amborella trichopoda
Atru.chr9.1467 Acer truncatum
AUR62010526 Chenopodium quinoa
AUR62017369 Chenopodium quinoa
AUR62036320 Chenopodium quinoa
BcaC09g51074 Brassica carinata
BcaC09g51075 Brassica carinata
BcaC09g51076 Brassica carinata
BcaNung01024 Brassica carinata
BcaNung01028 Brassica carinata
BcaNung01670 Brassica carinata
BolC1t01663H Brassica oleracea
BolC7t45712H Brassica oleracea
BraA01t01354Z Brassica rapa
BraA03t14445Z Brassica rapa
C01p17240 Brassica napus
C01p17270 Brassica napus
C07p52150 Brassica napus
C07p52170 Brassica napus
CARHR229780 Cardamine hirsuta
CARHR229790 Cardamine hirsuta
Carub.0007s1847 Capsella rubella
Ca_06684_v3 Cicer arietinum L.
Cc08_g13450 Coffea canephora
Cfa012037 Carpinus fangiana
Ciclev10019622m.g Citrus clementina
CiPaw.11G145700 Carya illinoinensis
CiPaw.12G103200 Carya illinoinensis
ClCG01G003520 Citrullus lanatus
COL.COLO4_23845 Corchorus olitorius
Cpa.g.sc29.67 Carica papaya
CsaV3_5G003620 Cucumis sativus L.
CSS0007387 Camellia sinensis var. sinensis
CSS0030545 Camellia sinensis var. sinensis
CSS0035292 Camellia sinensis var. sinensis
DCAR_032287 Daucus carota
Dinv08784 Davidia involucrata
Dinv39062 Davidia involucrata
Dinv42572 Davidia involucrata
Duzib205G1508 Durio zibethinus
ECA246G4810 Erigeron canadensis
EL10Ac5g12643 Beta vulgaris
Eucgr.D01969 Eucalyptus grandis
Eucgr.D01972 Eucalyptus grandis
FAN04G1636 Fragaria x ananassa
FAN08G1627 Fragaria x ananassa
FAN13G2570 Fragaria x ananassa
FAN18G0648 Fragaria x ananassa
FvH4_5g00900 Fragaria vesca
Glyma.01G213000 Glycine max
Glyma.05G054000 Glycine max
Glyma.05G054100 Glycine max
Glyma.11G028900 Glycine max
Glyma.17G136350 Glycine max
Glyma.17G136400 Glycine max
Glyma.17G136500 Glycine max
Gohir.A03G011100 Gossypium hirsutum
Gohir.A03G011150 Gossypium hirsutum
Gohir.D03G158800 Gossypium hirsutum
Gorai.003G167400 Gossypium raimondii
HanXRQChr06g0164891 Helianthus annuus
HanXRQChr17g0533221 Helianthus annuus
Haze_09039 Corylus avellana
Hma1.2p1_0138F.1_g063060 Hydrangea macrophylla
HPP92_007264 Vanilla planifolia
HPP92_007270 Vanilla planifolia
HPP92_020634 Vanilla planifolia
HPP92_026373 Vanilla planifolia
Lalb_Chr09g0324581 Lupinus albus
Lj2C205T3 Lonicera japonica
Lj2C205T4 Lonicera japonica
Lj2g0028155 Lotus japonicus
Lsat_1_v5_gn_3_3140 Lactuca sativa
Manes.02G032300 Manihot esculenta
MD04G1077400 Malus domestica
MD04G1077500 Malus domestica
MD06G1067200 Malus domestica
MD06G1067300 Malus domestica
MD06G1067400 Malus domestica
MD17G1137500 Malus domestica
Medtr5g011540 Medicago truncatula
MELO3C005592.2 Cucumis melo
Migut.A00844 Erythranthe guttata
Migut.A00846 Erythranthe guttata
Nitab4.5_0000439g0020 Nicotiana tabacum
Nitab4.5_0000633g0060 Nicotiana tabacum
Nitab4.5_0009287g0010 Nicotiana tabacum
Nitab4.5_0012196g0010 Nicotiana tabacum
Nn1g01202 Nelumbo nucifera
Oeu056798.1 Olea europaea
Oeu064718.1 Olea europaea
Os03g0858800 Oryza sativa ssp. japonica
Peaxi162Scf00051g00032 Petunia axillaris
Peaxi162Scf00620g10013 Petunia axillaris
PGR031G2100 Punica granatum
PGSC0003DMG400003946 Solanum tuberosum
PGSC0003DMG400017565 Solanum tuberosum
Phvul.002G151500 Phaseolus vulgaris
Potri.001G115400 Populus trichocarpa
Potri.003G116700 Populus trichocarpa
Prupe.5G082100 Prunus persica
Psat2g180040 Pisum sativum
PSO478G4276 Papaver somniferum
PSO782G1759 Papaver somniferum
QL12p015442 Quercus lobata
QL12p015452 Quercus lobata
RcHm_v2.0_Chr7g0200481 Rosa chinensis
RcHm_v2.0_Chr7g0200881 Rosa chinensis
Rhsim07G0100400 Rhododendron simsii
Sabra01G0088500 Salix brachista
Sabra03G0081200 Salix brachista
SalBow6G1389 Salvia bowleyana
Sc22g0000490 Simmondsia chinensis
Sed0010196 Sechium edule
SEGI_33296 Sequoiadendron giganteum
SGA_v2.0_scaffold37G14846 Striga asiatica
Solyc06g060530.1 Solanum lycopersicum
Solyc08g079730.2 Solanum lycopersicum
Sopen06g020650 Solanum pennellii
Sopen08g028090 Solanum pennellii
Sp7g20850 Schrenkiella parvula
TAR375G0934 Trochodendron aralioides
THA.LOC104806352 Tarenaya hassleriana
Thecc.03G263800 Theobroma cacao
Thhalv10025023m.g Eutrema salsugineum
TPR.G19576 Trifolium pratense
TWI15G1021 Tripterygium wilfordii
TWI60G0788 Tripterygium wilfordii
unitig_52.g17224 Utricularia gibba
VMungo1215G0749 Vigna mungo
Zm00001eb065100 Zea mays

User provided reference genes

Program Settings