Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Actinidia08997 Actinidia chinensis
Actinidia08999 Actinidia chinensis
Actinidia30270 Actinidia chinensis
Ah.10g035060 Amaranthus hybridus
Ah.16g105700 Amaranthus hybridus
Aqoxy1G03882 Aquilegia oxysepala
Aqoxy7G01506 Aquilegia oxysepala
Aqoxy7G03920 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.ERQ37Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VF9H9Z Arachis hypogaea
ATR0171G005 Amborella trichopoda
Atru.chr7.2101 Acer truncatum
Atru.chr7.2117 Acer truncatum
AUR62009292 Chenopodium quinoa
AUR62009293 Chenopodium quinoa
AUR62009296 Chenopodium quinoa
AUR62026130 Chenopodium quinoa
AUR62030399 Chenopodium quinoa
AUR62039690 Chenopodium quinoa
AUR62041707 Chenopodium quinoa
AUR62041710 Chenopodium quinoa
AUR62043391 Chenopodium quinoa
AUR62043394 Chenopodium quinoa
AUR62044183 Chenopodium quinoa
CANSAT25G0078 Cannabis sativa
Ca_15600_v3 Cicer arietinum L.
Cc04_g02850 Coffea canephora
Cc08_g09440 Coffea canephora
Cfa002109 Carpinus fangiana
Cfa013377 Carpinus fangiana
Ciclev10008234m.g Citrus clementina
CiPaw.01G234000 Carya illinoinensis
CiPaw.02G147800 Carya illinoinensis
CiPaw.07G204900 Carya illinoinensis
ClCG07G013210 Citrullus lanatus
COL.COLO4_18656 Corchorus olitorius
CsaV3_3G023760 Cucumis sativus L.
CSS0000941 Camellia sinensis var. sinensis
CSS0014295 Camellia sinensis var. sinensis
CSS0042960 Camellia sinensis var. sinensis
CSS0047985 Camellia sinensis var. sinensis
DCAR_004476 Daucus carota
Dinv14253 Davidia involucrata
Dinv30281 Davidia involucrata
Dinv30465 Davidia involucrata
Dinv38004 Davidia involucrata
Duzib168G0898 Durio zibethinus
Duzib187G1218 Durio zibethinus
EL10Ac2g04025 Beta vulgaris
EL10Ac2g04030 Beta vulgaris
EL10Ac2g04032 Beta vulgaris
EL10Ac3g07163 Beta vulgaris
Eucgr.F03053 Eucalyptus grandis
FAN14G3521 Fragaria x ananassa
FAN20G2262 Fragaria x ananassa
FAN27G3253 Fragaria x ananassa
FvH4_2g35690 Fragaria vesca
FvH4_6g31961 Fragaria vesca
Glyma.06G084700 Glycine max
Gohir.A06G093700 Gossypium hirsutum
Gohir.A13G186100 Gossypium hirsutum
Gohir.D06G093400 Gossypium hirsutum
Gohir.D13G192900 Gossypium hirsutum
Gorai.010G107800 Gossypium raimondii
Gorai.013G218800 Gossypium raimondii
GSVIVG01035639001 Vitis vinifera
Hma1.2p1_0590F.1_g185130 Hydrangea macrophylla
Hma1.2p1_1689F.1_g297730 Hydrangea macrophylla
Lalb_Chr08g0243101 Lupinus albus
Lj1g0012409 Lotus japonicus
Lj5C56G7 Lonicera japonica
Lj7P703T49 Lonicera japonica
Lj9P510T74 Lonicera japonica
Manes.03G062400 Manihot esculenta
MBI01_g06186_MAGBIO Magnolia biondii
MBI03_g45147_MAGBIO Magnolia biondii
MBI03_g46671_MAGBIO Magnolia biondii
MBI03_g46672_MAGBIO Magnolia biondii
MBI04_g02612_MAGBIO Magnolia biondii
MD08G1115200 Malus domestica
MD09G1207500 Malus domestica
MD17G1188800 Malus domestica
Medtr4g039880 Medicago truncatula
MELO3C003461.2 Cucumis melo
MELO3C012985.2 Cucumis melo
Migut.A00216 Erythranthe guttata
Migut.D01007 Erythranthe guttata
MSTRG.11043 Avicennia marina
MSTRG.11702 Avicennia marina
MSTRG.25905 Avicennia marina
Nitab4.5_0000151g0400 Nicotiana tabacum
Nitab4.5_0000837g0070 Nicotiana tabacum
Nn2g11644 Nelumbo nucifera
Nn3g18155 Nelumbo nucifera
Nn3g18156 Nelumbo nucifera
Oeu036365.1 Olea europaea
Oeu040357.1 Olea europaea
Oeu050613.1 Olea europaea
Oeu053987.1 Olea europaea
Os01g0232200 Oryza sativa ssp. japonica
PGR044G2181 Punica granatum
PGR102G1576 Punica granatum
PGSC0003DMG400009600 Solanum tuberosum
Phvul.009G108900 Phaseolus vulgaris
Potri.006G239600 Populus trichocarpa
Prupe.1G449400 Prunus persica
Prupe.3G063300 Prunus persica
Psat5g022120 Pisum sativum
PSO210G5506 Papaver somniferum
PSO210G7284 Papaver somniferum
QL05p021212 Quercus lobata
QL05p021232 Quercus lobata
QL12p029125 Quercus lobata
RcHm_v2.0_Chr2g0139471 Rosa chinensis
RcHm_v2.0_Chr6g0306111 Rosa chinensis
Rhsim12G0201600 Rhododendron simsii
Sabra06G0187200 Salix brachista
SalBow4G0122 Salvia bowleyana
SalBow4G2370 Salvia bowleyana
SalBow4G2932 Salvia bowleyana
SalBow7G0919 Salvia bowleyana
Sc03g0001210 Simmondsia chinensis
Sed0017283 Sechium edule
SEGI_05211 Sequoiadendron giganteum
SGA_v2.0_scaffold5G02538 Striga asiatica
Sopen08g020800 Solanum pennellii
TAR102G0001 Trochodendron aralioides
TAR375G0335 Trochodendron aralioides
TAR624G0894 Trochodendron aralioides
TAR624G0965 Trochodendron aralioides
TAR624G1294 Trochodendron aralioides
Thecc.09G043500 Theobroma cacao
TPR.G1389 Trifolium pratense
TWI63G0644 Tripterygium wilfordii
unitig_22.g5755 Utricularia gibba
unitig_22.g5756 Utricularia gibba
unitig_748.g7503 Utricularia gibba
unitig_748.g7993 Utricularia gibba
unitig_8.g4046 Utricularia gibba
unitig_88.g27691 Utricularia gibba
unitig_9.g29490 Utricularia gibba
VMungo1309G0607 Vigna mungo
Zm00001eb119190 Zea mays
Zm00001eb339280 Zea mays

User provided reference genes

Program Settings