Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p12890 Brassica napus
Aa31LG10G13720 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3807 Anthoceros agrestis
Actinidia33215 Actinidia chinensis
Ah.03g134830 Amaranthus hybridus
AL3G42300 Arabidopsis lyrata
Aqoxy3G02559 Aquilegia oxysepala
Aqoxy3G03456 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.AR8P07 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MXBT1J Arachis hypogaea
AT2G04660 Arabidopsis thaliana
ATR0564G449 Amborella trichopoda
Atru.chr10.1247 Acer truncatum
Atru.chr11.1746 Acer truncatum
AUR62005824 Chenopodium quinoa
AUR62032818 Chenopodium quinoa
BcaB05g21922 Brassica carinata
BcaB06g27417 Brassica carinata
BcaC03g13079 Brassica carinata
BolC2t06011H Brassica oleracea
BolC4t26245H Brassica oleracea
BraA02t04684Z Brassica rapa
BraA04t16952Z Brassica rapa
C02p00140 Brassica napus
C04p46590 Brassica napus
CAN.G1335.16 Capsicum annuum
CANSAT64G1884 Cannabis sativa
CARHR261990 Cardamine hirsuta
Carub.0003s2628 Capsella rubella
Ca_18821_v3 Cicer arietinum L.
Ca_29729_v3 Cicer arietinum L.
Ca_30738_v3 Cicer arietinum L.
CBR_g543 Chara braunii
CBR_g545 Chara braunii
Cc11_g12720 Coffea canephora
CDE04G0644 Ceratophyllum demersum
Cfa008953 Carpinus fangiana
Ciclev10030675m.g Citrus clementina
CiPaw.05G131900 Carya illinoinensis
ClCG09G021920 Citrullus lanatus
COL.COLO4_27998 Corchorus olitorius
Cpa.g.sc1.50 Carica papaya
Cre10.g460532 Chlamydomonas reinhardtii
CsaV3_5G025240 Cucumis sativus L.
CSS0018825 Camellia sinensis var. sinensis
DCAR_027428 Daucus carota
Dinv16674 Davidia involucrata
Duzib251G0421 Durio zibethinus
ECA233G3760 Erigeron canadensis
EL10Ac6g13244 Beta vulgaris
Eucgr.I00217 Eucalyptus grandis
Eucgr.L00670 Eucalyptus grandis
Eucgr.L00684 Eucalyptus grandis
FAN04G3196 Fragaria x ananassa
FAN13G0065 Fragaria x ananassa
FAN18G2257 Fragaria x ananassa
FvH4_5g29350 Fragaria vesca
Glyma.10G070000 Glycine max
Glyma.11G220500 Glycine max
Glyma.18G036900 Glycine max
Gohir.A13G077700 Gossypium hirsutum
Gohir.D13G076900 Gossypium hirsutum
Gorai.013G087900 Gossypium raimondii
GSVIVG01019948001 Vitis vinifera
HanXRQChr12g0362121 Helianthus annuus
Haze_11982 Corylus avellana
HPP92_021921 Vanilla planifolia
HPP92_022007 Vanilla planifolia
HPP92_022008 Vanilla planifolia
Hund25218 Selenicereus undatus
Lalb_Chr05g0220271 Lupinus albus
Lj1g0001827 Lotus japonicus
Lj3A1035G45 Lonicera japonica
Lj4g0013877 Lotus japonicus
Lsat_1_v5_gn_8_50141 Lactuca sativa
Manes.01G034000 Manihot esculenta
Mapoly0122s0055 Marchantia polymorpha
MBI05_g36413_MAGBIO Magnolia biondii
MCO02G279 Micromonas commoda
MD13G1068900 Malus domestica
MD16G1069200 Malus domestica
Medtr4g082150 Medicago truncatula
Medtr4g082265 Medicago truncatula
Medtr7g021880 Medicago truncatula
MELO3C002960.2 Cucumis melo
Migut.L01267 Erythranthe guttata
MSTRG.717 Avicennia marina
Nitab4.5_0000040g0090 Nicotiana tabacum
Nitab4.5_0004300g0030 Nicotiana tabacum
Nn1g04519 Nelumbo nucifera
Nn1g04520 Nelumbo nucifera
Nn1g04521 Nelumbo nucifera
Nn4g23232 Nelumbo nucifera
Oeu005760.1 Olea europaea
Oeu050624.1 Olea europaea
Os04g0484800 Oryza sativa ssp. japonica
Peaxi162Scf00222g00716 Petunia axillaris
PGR102G3073 Punica granatum
PGSC0003DMG400018437 Solanum tuberosum
Phvul.001G233800 Phaseolus vulgaris
Potri.008G089600 Populus trichocarpa
Pp3c11_22070 Physcomitrium patens
PRCOL_00002008 Prasinoderma coloniale
Prupe.1G035400 Prunus persica
Prupe.1G191200 Prunus persica
Psat7g160080 Pisum sativum
PSO063G1986 Papaver somniferum
PSO423G0166 Papaver somniferum
PSO832G0091 Papaver somniferum
QL03p068099 Quercus lobata
RcHm_v2.0_Chr1g0327871 Rosa chinensis
RcHm_v2.0_Chr4g0439421 Rosa chinensis
Rhsim10G0051900 Rhododendron simsii
Rhsim10G0119600 Rhododendron simsii
Sabra08G0067000 Salix brachista
SalBow2G1648 Salvia bowleyana
Sc11g0002100 Simmondsia chinensis
Sed0000698 Sechium edule
SEGI_17726 Sequoiadendron giganteum
SGA_v2.0_scaffold172G38951 Striga asiatica
SHI21659 Sapria himalayana
SHI21660 Sapria himalayana
SHI21661 Sapria himalayana
SMO361G0530 Selaginella moellendorffii
Solyc05g007750.4 Solanum lycopersicum
Sopen05g003610 Solanum pennellii
Sp7g01960 Schrenkiella parvula
TAR629G2604 Trochodendron aralioides
THA.LOC104801804 Tarenaya hassleriana
Thecc.02G342300 Theobroma cacao
Thhalv10027638m.g Eutrema salsugineum
TPR.G26175 Trifolium pratense
TPR.G26189 Trifolium pratense
TPR.G34046 Trifolium pratense
TPR.G5981 Trifolium pratense
TWI79G0307 Tripterygium wilfordii
unitig_747.g21183 Utricularia gibba
vmacro05169 Vaccinium macrocarpon
vmacro05170 Vaccinium macrocarpon
vmacro05171 Vaccinium macrocarpon
vmacro05308 Vaccinium macrocarpon
vmacro11375 Vaccinium macrocarpon
VMungo1383G3199 Vigna mungo
Zm00001eb227040 Zea mays

User provided reference genes

Program Settings