Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Aa31LG1G11100 Aethionema arabicum
Aa31LG1G11110 Aethionema arabicum
Actinidia20916 Actinidia chinensis
Actinidia32851 Actinidia chinensis
Actinidia34119 Actinidia chinensis
Ah.05g180710 Amaranthus hybridus
AL1G10610 Arabidopsis lyrata
Aqoxy7G00339 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.D8DQXR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G5US7K Arachis hypogaea
AT1G01730 Arabidopsis thaliana
ATR0680G132 Amborella trichopoda
Atru.chr1.440 Acer truncatum
Atru.chr1.441 Acer truncatum
Atru.chr5.466 Acer truncatum
AUR62004342 Chenopodium quinoa
AUR62022549 Chenopodium quinoa
BraA09t42260Z Brassica rapa
CANSAT56G3377 Cannabis sativa
CARHR000590 Cardamine hirsuta
CARHR000610 Cardamine hirsuta
Carub.0001s0048 Capsella rubella
Ca_07909_v3 Cicer arietinum L.
Cc02_g37850 Coffea canephora
CDE08G1175 Ceratophyllum demersum
Cfa003939 Carpinus fangiana
Ciclev10006075m.g Citrus clementina
Ciclev10021865m.g Citrus clementina
CiPaw.02G029900 Carya illinoinensis
ClCG06G003800 Citrullus lanatus
COL.COLO4_12698 Corchorus olitorius
COL.COLO4_14330 Corchorus olitorius
Cpa.g.sc18.245 Carica papaya
CsaV3_6G000470 Cucumis sativus L.
CSS0033809 Camellia sinensis var. sinensis
CSS0040093 Camellia sinensis var. sinensis
CSS0041755 Camellia sinensis var. sinensis
DCAR_000242 Daucus carota
DCAR_010300 Daucus carota
Dinv35219 Davidia involucrata
Dinv43805 Davidia involucrata
Duzib133G0249 Durio zibethinus
Duzib205G1257 Durio zibethinus
ECA234G3275 Erigeron canadensis
EL10Ac1g00429 Beta vulgaris
Eucgr.D02282 Eucalyptus grandis
Eucgr.E00158 Eucalyptus grandis
FAN01G2456 Fragaria x ananassa
FAN03G1221 Fragaria x ananassa
FAN03G1577 Fragaria x ananassa
FAN06G0563 Fragaria x ananassa
FAN06G3705 Fragaria x ananassa
FAN06G4288 Fragaria x ananassa
FAN10G0042 Fragaria x ananassa
FAN10G0871 Fragaria x ananassa
FAN10G1555 Fragaria x ananassa
FAN10G2377 Fragaria x ananassa
FAN10G3657 Fragaria x ananassa
FAN10G3879 Fragaria x ananassa
FAN10G4254 Fragaria x ananassa
FAN28G3009 Fragaria x ananassa
FvH4_7g14150 Fragaria vesca
FvH4_7g29600 Fragaria vesca
Glyma.18G231900 Glycine max
Gohir.A08G130800 Gossypium hirsutum
Gohir.A09G041765 Gossypium hirsutum
Gohir.A11G088100 Gossypium hirsutum
Gohir.D08G152300 Gossypium hirsutum
Gohir.D11G092400 Gossypium hirsutum
Gorai.004G158200 Gossypium raimondii
Gorai.007G098700 Gossypium raimondii
GSVIVG01026893001 Vitis vinifera
HanXRQChr16g0522831 Helianthus annuus
Haze_15487 Corylus avellana
Hma1.2p1_0001F.1_g001380 Hydrangea macrophylla
HPP92_022052 Vanilla planifolia
HPP92_027620 Vanilla planifolia
Hund16930 Selenicereus undatus
Lalb_Chr01g0011531 Lupinus albus
Lalb_Chr24g0401631 Lupinus albus
Lj1g0004821 Lotus japonicus
Lj9A582T87 Lonicera japonica
Lsat_1_v5_gn_4_36280 Lactuca sativa
Manes.01G258500 Manihot esculenta
Manes.05G036200 Manihot esculenta
Manes.06G148200 Manihot esculenta
MBI17_g24635_MAGBIO Magnolia biondii
MD01G1056800 Malus domestica
MD01G1057500 Malus domestica
MD01G1202200 Malus domestica
MD07G1139200 Malus domestica
Medtr7g077380 Medicago truncatula
MELO3C021217.2 Cucumis melo
Migut.B01742 Erythranthe guttata
MSTRG.20826 Avicennia marina
Nitab4.5_0001702g0150 Nicotiana tabacum
Nitab4.5_0008050g0010 Nicotiana tabacum
Nn1g01501 Nelumbo nucifera
Nn6g33454 Nelumbo nucifera
Oeu056369.1 Olea europaea
Os04g0556900 Oryza sativa ssp. japonica
Peaxi162Scf00191g01425 Petunia axillaris
PGR031G3282 Punica granatum
PGR042G0868 Punica granatum
PGSC0003DMG400021656 Solanum tuberosum
Phvul.008G065800 Phaseolus vulgaris
Potri.002G158500 Populus trichocarpa
Potri.014G082600 Populus trichocarpa
Potri.015G145000 Populus trichocarpa
Prupe.2G167900 Prunus persica
Prupe.2G295600 Prunus persica
Psat3g109400 Pisum sativum
PSO478G0766 Papaver somniferum
PSO782G1827 Papaver somniferum
QL08p049031 Quercus lobata
QL09p013904 Quercus lobata
RcHm_v2.0_Chr1g0354801 Rosa chinensis
RcHm_v2.0_Chr1g0355051 Rosa chinensis
RcHm_v2.0_Chr1g0377581 Rosa chinensis
Rhsim03G0187100 Rhododendron simsii
Sabra02G0126000 Salix brachista
Sabra14G0059900 Salix brachista
SalBow3G2019 Salvia bowleyana
Sc01g0003360 Simmondsia chinensis
Sed0017642 Sechium edule
Sed0025837 Sechium edule
SEGI_25569 Sequoiadendron giganteum
SGA_v2.0_scaffold11G05663 Striga asiatica
Solyc05g049880.3 Solanum lycopersicum
Sopen05g028210 Solanum pennellii
Sp1g00570 Schrenkiella parvula
TAR375G0799 Trochodendron aralioides
THA.LOC104801446 Tarenaya hassleriana
Thecc.01G360700 Theobroma cacao
Thhalv10008538m.g Eutrema salsugineum
TPR.G37815 Trifolium pratense
TWI14G0016 Tripterygium wilfordii
TWI59G0064 Tripterygium wilfordii
unitig_61.g26388 Utricularia gibba
vmacro06668 Vaccinium macrocarpon
vmacro13291 Vaccinium macrocarpon
VMungo1383G2792 Vigna mungo
VMungo1383G2823 Vigna mungo
Zm00001eb429400 Zea mays

User provided reference genes

Program Settings