Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p27170 Brassica napus
Aa31LG9G12210 Aethionema arabicum
Actinidia05204 Actinidia chinensis
Actinidia27464 Actinidia chinensis
Ah.02g116720 Amaranthus hybridus
AL4G31810 Arabidopsis lyrata
Aqoxy7G00759 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.BT71C1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LCH2QT Arachis hypogaea
AT2G35720 Arabidopsis thaliana
ATR0317G109 Amborella trichopoda
Atru.chr9.1319 Acer truncatum
AUR62007515 Chenopodium quinoa
AUR62042790 Chenopodium quinoa
AUR62042791 Chenopodium quinoa
AUR62044247 Chenopodium quinoa
AUR62044248 Chenopodium quinoa
BcaB06g28865 Brassica carinata
BcaB08g34772 Brassica carinata
BcaC02g07676 Brassica carinata
BolC4t27945H Brassica oleracea
BraA04t18215Z Brassica rapa
C04p64680 Brassica napus
CAN.G1367.6 Capsicum annuum
CANSAT21G0216 Cannabis sativa
CARHR129960 Cardamine hirsuta
Carub.0004s1745 Capsella rubella
Ca_24574_v3 Cicer arietinum L.
Ca_24575_v3 Cicer arietinum L.
CBR_g27963 Chara braunii
Cc08_g12460 Coffea canephora
Cc08_g12480 Coffea canephora
CDE04G0953 Ceratophyllum demersum
CDE12G0157 Ceratophyllum demersum
CDE12G0732 Ceratophyllum demersum
CDE12G0753 Ceratophyllum demersum
Ciclev10019626m.g Citrus clementina
CiPaw.11G153900 Carya illinoinensis
ClCG10G002710 Citrullus lanatus
COL.COLO4_37182 Corchorus olitorius
Cpa.g.sc29.153 Carica papaya
Cre06.g308150 Chlamydomonas reinhardtii
CsaV3_3G002740 Cucumis sativus L.
CSS0002787 Camellia sinensis var. sinensis
CSS0003507 Camellia sinensis var. sinensis
CSS0011263 Camellia sinensis var. sinensis
CSS0039308 Camellia sinensis var. sinensis
CSS0039357 Camellia sinensis var. sinensis
DCAR_027776 Daucus carota
Dinv21636 Davidia involucrata
Dinv39144 Davidia involucrata
Duzib084G0473 Durio zibethinus
ECA240G4831 Erigeron canadensis
EL10Ac5g13072 Beta vulgaris
Eucgr.E00426 Eucalyptus grandis
FAN04G2371 Fragaria x ananassa
FAN08G0881 Fragaria x ananassa
FAN13G0823 Fragaria x ananassa
FAN18G0938 Fragaria x ananassa
FAN18G2353 Fragaria x ananassa
FvH4_5g18830 Fragaria vesca
Glyma.01G209800 Glycine max
Glyma.11G032400 Glycine max
Gohir.A03G008300 Gossypium hirsutum
Gohir.D03G162600 Gossypium hirsutum
Gorai.003G171200 Gossypium raimondii
GSVIVG01001321001 Vitis vinifera
HanXRQChr03g0088591 Helianthus annuus
HanXRQChr11g0324981 Helianthus annuus
HanXRQChr17g0553071 Helianthus annuus
Haze_07917 Corylus avellana
HPP92_015035 Vanilla planifolia
HPP92_015036 Vanilla planifolia
HPP92_015106 Vanilla planifolia
HPP92_015107 Vanilla planifolia
HPP92_015115 Vanilla planifolia
Hund14561 Selenicereus undatus
Lalb_Chr05g0214491 Lupinus albus
Lalb_Chr09g0324401 Lupinus albus
Lj2A217G28 Lonicera japonica
Lj2g0013106 Lotus japonicus
Lsat_1_v5_gn_5_20860 Lactuca sativa
Lsat_1_v5_gn_6_91180 Lactuca sativa
Manes.01G080300 Manihot esculenta
Manes.02G039200 Manihot esculenta
Mapoly0099s0041 Marchantia polymorpha
MBI04_g09494_MAGBIO Magnolia biondii
MCO16G272 Micromonas commoda
MD06G1057900 Malus domestica
Medtr5g012530 Medicago truncatula
MELO3C013942.2 Cucumis melo
Migut.E00837 Erythranthe guttata
Migut.E01656 Erythranthe guttata
MSTRG.25527 Avicennia marina
Nitab4.5_0000312g0100 Nicotiana tabacum
Nitab4.5_0007598g0020 Nicotiana tabacum
Nn1g01007 Nelumbo nucifera
Nn6g33968 Nelumbo nucifera
Oeu040216.1 Olea europaea
Os10g0507800 Oryza sativa ssp. japonica
Peaxi162Scf00174g00027 Petunia axillaris
PGR042G1820 Punica granatum
PGSC0003DMG400004811 Solanum tuberosum
Phvul.002G062800 Phaseolus vulgaris
Potri.001G158200 Populus trichocarpa
Potri.003G076600 Populus trichocarpa
Pp3c26_4030 Physcomitrium patens
Pp3c26_4130 Physcomitrium patens
Pp3c3_14420 Physcomitrium patens
PRCOL_00004836 Prasinoderma coloniale
Prupe.5G069100 Prunus persica
Prupe.5G069200 Prunus persica
Psat2g177520 Pisum sativum
PSO017G6196 Papaver somniferum
PSO170G3683 Papaver somniferum
QL12p012213 Quercus lobata
RcHm_v2.0_Chr7g0203181 Rosa chinensis
Rhsim07G0108200 Rhododendron simsii
Sabra01G0133300 Salix brachista
Sc01g0008460 Simmondsia chinensis
Sed0003796 Sechium edule
SEGI_16043 Sequoiadendron giganteum
SGA_v2.0_scaffold54G19448 Striga asiatica
SHI35069 Sapria himalayana
SMO172G0088 Selaginella moellendorffii
SMO172G0123 Selaginella moellendorffii
Solyc08g078660.3 Solanum lycopersicum
Sopen08g027140 Solanum pennellii
Sp4g17990 Schrenkiella parvula
TAR629G2416 Trochodendron aralioides
THA.LOC104815494 Tarenaya hassleriana
Thecc.03G252000 Theobroma cacao
Thhalv10016484m.g Eutrema salsugineum
TPR.G25879 Trifolium pratense
TWI60G0726 Tripterygium wilfordii
TWI81G0349 Tripterygium wilfordii
unitig_8.g3912 Utricularia gibba
unitig_8.g3913 Utricularia gibba
vmacro14088 Vaccinium macrocarpon
VMungo1215G2766 Vigna mungo
Zm00001eb043970 Zea mays
Zm00001eb442210 Zea mays
Zm00001eb442450 Zea mays
Zm00001eb442460 Zea mays

User provided reference genes

Program Settings