Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p18830 Brassica napus
Aa31LG1G13510 Aethionema arabicum
Actinidia25692 Actinidia chinensis
Actinidia27573 Actinidia chinensis
Ah.10g033940 Amaranthus hybridus
AL6G32860 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.1E8W48 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.76U9D5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7YV5MC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HS4ETS Arachis hypogaea
AT5G21482 Arabidopsis thaliana
ATR0598G261 Amborella trichopoda
Atru.chr7.1849 Acer truncatum
AUR62009081 Chenopodium quinoa
AUR62020585 Chenopodium quinoa
BcaB05g22764 Brassica carinata
BcaB08g36471 Brassica carinata
BcaC03g13842 Brassica carinata
BcaC04g19509 Brassica carinata
BNapus_Darmor_BZH_scaffold_38p01010 Brassica napus
BolC2t07118H Brassica oleracea
BolC9t58344H Brassica oleracea
BraA02t05627Z Brassica rapa
BraA10t43962Z Brassica rapa
C09p54840 Brassica napus
CAN.G567.3 Capsicum annuum
CAN.G6.10 Capsicum annuum
CAN.G726.14 Capsicum annuum
CANSAT25G3768 Cannabis sativa
CARHR191650 Cardamine hirsuta
Carub.0006s1953 Capsella rubella
Ca_13108_v3 Cicer arietinum L.
Cc08_g01180 Coffea canephora
CDE06G0608 Ceratophyllum demersum
CDE07G0911 Ceratophyllum demersum
Cfa017875 Carpinus fangiana
Ciclev10007999m.g Citrus clementina
CiPaw.15G092000 Carya illinoinensis
ClCG05G015730 Citrullus lanatus
COL.COLO4_21137 Corchorus olitorius
Cpa.g.sc126.29 Carica papaya
CsaV3_4G036030 Cucumis sativus L.
CSS0003687 Camellia sinensis var. sinensis
DCAR_001220 Daucus carota
DCAR_004381 Daucus carota
Dinv04363 Davidia involucrata
Duzib150G1446 Durio zibethinus
Duzib168G1163 Durio zibethinus
Duzib187G1275 Durio zibethinus
ECA240G2523 Erigeron canadensis
EL10Ac2g03785 Beta vulgaris
Eucgr.C03157 Eucalyptus grandis
FAN11G0726 Fragaria x ananassa
FAN16G2205 Fragaria x ananassa
FAN20G1139 Fragaria x ananassa
FAN21G1915 Fragaria x ananassa
FAN24G2163 Fragaria x ananassa
FAN25G2088 Fragaria x ananassa
FAN27G3506 Fragaria x ananassa
FvH4_2g30990 Fragaria vesca
FvH4_3g04610 Fragaria vesca
Glyma.04G055600 Glycine max
Glyma.14G099000 Glycine max
Glyma.17G225700 Glycine max
Gohir.A05G038800 Gossypium hirsutum
Gohir.A06G081700 Gossypium hirsutum
Gohir.A08G247400 Gossypium hirsutum
Gohir.A13G188000 Gossypium hirsutum
Gohir.D05G040300 Gossypium hirsutum
Gohir.D06G083200 Gossypium hirsutum
Gohir.D08G268600 Gossypium hirsutum
Gohir.D13G194900 Gossypium hirsutum
Gorai.004G286300 Gossypium raimondii
Gorai.009G040700 Gossypium raimondii
Gorai.010G096700 Gossypium raimondii
Gorai.013G221000 Gossypium raimondii
GSVIVG01035468001 Vitis vinifera
HanXRQChr03g0066891 Helianthus annuus
Haze_18292 Corylus avellana
HPP92_016196 Vanilla planifolia
HPP92_019324 Vanilla planifolia
Hund03298 Selenicereus undatus
Hund19423 Selenicereus undatus
Lalb_Chr14g0366471 Lupinus albus
Lalb_Chr22g0356241 Lupinus albus
Lj5g0020207 Lotus japonicus
Lj7C223T2 Lonicera japonica
Lsat_1_v5_gn_7_58561 Lactuca sativa
Manes.03G052900 Manihot esculenta
Manes.16G085500 Manihot esculenta
MBI13_g11332_MAGBIO Magnolia biondii
MD08G1071200 Malus domestica
MD15G1050100 Malus domestica
Medtr1g015410 Medicago truncatula
MELO3C016911.2 Cucumis melo
Migut.A00080 Erythranthe guttata
Nitab4.5_0000341g0010 Nicotiana tabacum
Nitab4.5_0000446g0210 Nicotiana tabacum
Nn8g38686 Nelumbo nucifera
Nn8g38688 Nelumbo nucifera
Oeu047077.1 Olea europaea
Os08g0460600 Oryza sativa ssp. japonica
Peaxi162Scf00101g01910 Petunia axillaris
PGR044G2525 Punica granatum
PGR045G0002 Punica granatum
PGR102G2775 Punica granatum
PGR142G1458 Punica granatum
PGSC0003DMG400031420 Solanum tuberosum
PGSC0003DMG400031421 Solanum tuberosum
Phvul.001G038800 Phaseolus vulgaris
Phvul.009G081666 Phaseolus vulgaris
Phvul.009G081800 Phaseolus vulgaris
Phvul.L001656 Phaseolus vulgaris
Potri.006G221000 Populus trichocarpa
Prupe.1G404300 Prunus persica
Psat6g022720 Pisum sativum
PSO210G5112 Papaver somniferum
PSO386G0136 Papaver somniferum
QL02p016975 Quercus lobata
RcHm_v2.0_Chr6g0311781 Rosa chinensis
Sabra06G0170800 Salix brachista
SalBow4G0819 Salvia bowleyana
Sc09g0010100 Simmondsia chinensis
Sed0013093 Sechium edule
Sed0018261 Sechium edule
SEGI_06794 Sequoiadendron giganteum
SEGI_07268 Sequoiadendron giganteum
SGA_v2.0_scaffold20G09166 Striga asiatica
Solyc08g061930.4 Solanum lycopersicum
Sopen08g017300 Solanum pennellii
Sopen08g017330 Solanum pennellii
Sp6g23300 Schrenkiella parvula
TAR383G1073 Trochodendron aralioides
TAR626G0373 Trochodendron aralioides
TAR626G1574 Trochodendron aralioides
THA.LOC104799579 Tarenaya hassleriana
THA.LOC104810957 Tarenaya hassleriana
Thecc.09G063200 Theobroma cacao
Thhalv10013259m.g Eutrema salsugineum
TPR.G38831 Trifolium pratense
TWI34G0313 Tripterygium wilfordii
VMungo0647G1976 Vigna mungo
VMungo1309G3033 Vigna mungo
Zm00001eb040280 Zea mays

User provided reference genes

Program Settings