Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p39310 Brassica napus
A05p34980 Brassica napus
Aa31LG8G1680 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5770 Anthoceros agrestis
Actinidia18835 Actinidia chinensis
Actinidia35182 Actinidia chinensis
Ah.04g163770 Amaranthus hybridus
AL1G62330 Arabidopsis lyrata
AL3G26780 Arabidopsis lyrata
Aqoxy5G02206 Aquilegia oxysepala
Aqoxy6G01527 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.40W8ZN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R03DYD Arachis hypogaea
AT1G53660 Arabidopsis thaliana
AT3G14410 Arabidopsis thaliana
ATR1098G054 Amborella trichopoda
AUR62037933 Chenopodium quinoa
AUR62041787 Chenopodium quinoa
BcaB06g25387 Brassica carinata
BcaC09g48407 Brassica carinata
BolC1t04964H Brassica oleracea
BolC5t33970H Brassica oleracea
BraA01t03974Z Brassica rapa
BraA05t22312Z Brassica rapa
C01p50110 Brassica napus
C05p52930 Brassica napus
CAN.G1003.13 Capsicum annuum
CAN.G904.17 Capsicum annuum
CANSAT56G1666 Cannabis sativa
CARHR043950 Cardamine hirsuta
CARHR089370 Cardamine hirsuta
Carub.0001s4293 Capsella rubella
Carub.0003s1412 Capsella rubella
Cc05_g10130 Coffea canephora
CDE12G0400 Ceratophyllum demersum
CDE12G0720 Ceratophyllum demersum
Cfa002826 Carpinus fangiana
Cfa012623 Carpinus fangiana
Cfa019446 Carpinus fangiana
Ciclev10021024m.g Citrus clementina
CiPaw.12G011200 Carya illinoinensis
ClCG07G010570 Citrullus lanatus
COL.COLO4_17405 Corchorus olitorius
Cpa.g.sc77.101 Carica papaya
CsaV3_4G007740 Cucumis sativus L.
CSS0001830 Camellia sinensis var. sinensis
CSS0009575 Camellia sinensis var. sinensis
CSS0018557 Camellia sinensis var. sinensis
CSS0020138 Camellia sinensis var. sinensis
CSS0022887 Camellia sinensis var. sinensis
CSS0024325 Camellia sinensis var. sinensis
CSS0025188 Camellia sinensis var. sinensis
CSS0027027 Camellia sinensis var. sinensis
CSS0028185 Camellia sinensis var. sinensis
CSS0030033 Camellia sinensis var. sinensis
CSS0032718 Camellia sinensis var. sinensis
CSS0047455 Camellia sinensis var. sinensis
CSS0048394 Camellia sinensis var. sinensis
DCAR_013801 Daucus carota
DCAR_019641 Daucus carota
Dinv13304 Davidia involucrata
Dinv26660 Davidia involucrata
Duzib213G0134 Durio zibethinus
ECA236G2035 Erigeron canadensis
EL10Ac4g08508 Beta vulgaris
Eucgr.F03197 Eucalyptus grandis
FAN11G1508 Fragaria x ananassa
FAN25G2253 Fragaria x ananassa
FvH4_3g16500 Fragaria vesca
Glyma.08G175600 Glycine max
Glyma.15G251000 Glycine max
Gohir.A04G047200 Gossypium hirsutum
Gohir.D05G333000 Gossypium hirsutum
Gorai.009G358100 Gossypium raimondii
GSVIVG01027148001 Vitis vinifera
HanXRQChr11g0329971 Helianthus annuus
HanXRQChr11g0348921 Helianthus annuus
Haze_08504 Corylus avellana
Hma1.2p1_0198F.1_g085420 Hydrangea macrophylla
HPP92_004159 Vanilla planifolia
Hund10237 Selenicereus undatus
Lalb_Chr01g0016001 Lupinus albus
Lj1A808T27 Lonicera japonica
Lj3g0004844 Lotus japonicus
Lj3g0018021 Lotus japonicus
Lj8A141G34 Lonicera japonica
Lju3824A0T32 Lonicera japonica
Lsat_1_v5_gn_5_121040 Lactuca sativa
Lsat_1_v5_gn_7_99681 Lactuca sativa
Manes.03G083603 Manihot esculenta
MBI02_g24303_MAGBIO Magnolia biondii
MD05G1209500 Malus domestica
MD10G1195800 Malus domestica
Medtr2g070400 Medicago truncatula
MELO3C016164.2 Cucumis melo
Migut.H02069 Erythranthe guttata
MSTRG.14271 Avicennia marina
MSTRG.6704 Avicennia marina
Nitab4.5_0000923g0080 Nicotiana tabacum
Nitab4.5_0001864g0040 Nicotiana tabacum
Nitab4.5_0002209g0180 Nicotiana tabacum
Nitab4.5_0009476g0020 Nicotiana tabacum
Nn3g20390 Nelumbo nucifera
Oeu009894.1 Olea europaea
Oeu025322.2 Olea europaea
Oeu035498.1 Olea europaea
Os08g0135100 Oryza sativa ssp. japonica
Peaxi162Scf00035g01819 Petunia axillaris
Peaxi162Scf00111g00633 Petunia axillaris
PGR031G0778 Punica granatum
PGSC0003DMG400021291 Solanum tuberosum
PGSC0003DMG400027634 Solanum tuberosum
Phvul.005G052200 Phaseolus vulgaris
Potri.001G394500 Populus trichocarpa
Pp3c10_15150 Physcomitrium patens
Prupe.4G148000 Prunus persica
Psat1g010840 Pisum sativum
PSO541G6432 Papaver somniferum
PSO675G2861 Papaver somniferum
QL04p071264 Quercus lobata
RcHm_v2.0_Chr5g0027551 Rosa chinensis
Rhsim04G0033000 Rhododendron simsii
Sabra16G0258800 Salix brachista
SalBow7G0228 Salvia bowleyana
Sc01g0002500 Simmondsia chinensis
Sed0002221 Sechium edule
Sed0006663 Sechium edule
SGA_v2.0_scaffold73G24362 Striga asiatica
SMO271G0073 Selaginella moellendorffii
Solyc07g056530.3 Solanum lycopersicum
Solyc10g007610.4 Solanum lycopersicum
Sopen07g029890 Solanum pennellii
Sopen10g003530 Solanum pennellii
Sp3g12700 Schrenkiella parvula
TAR629G1654 Trochodendron aralioides
THA.LOC104822607 Tarenaya hassleriana
Thecc.07G147600 Theobroma cacao
Thhalv10011710m.g Eutrema salsugineum
Thhalv10021088m.g Eutrema salsugineum
TPR.G29762 Trifolium pratense
TWI38G1230 Tripterygium wilfordii
unitig_0.g2770 Utricularia gibba
vmacro09445 Vaccinium macrocarpon
VMungo1080G0682 Vigna mungo
Zm00001eb417010 Zea mays

User provided reference genes

Program Settings