Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p33460 Brassica napus
Aa31LG2G3150 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4243 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.3391 Anthoceros agrestis
Actinidia15923 Actinidia chinensis
Ah.10g037990 Amaranthus hybridus
AL2G23020 Arabidopsis lyrata
AL2G24330 Arabidopsis lyrata
Aqoxy3G04016 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3WSI1D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DT5JRU Arachis hypogaea
AT1G66510 Arabidopsis thaliana
ATR0686G028 Amborella trichopoda
Atru.chr4.1673 Acer truncatum
AUR62023197 Chenopodium quinoa
AUR62023246 Chenopodium quinoa
BcaB03g15263 Brassica carinata
BcaC08g46049 Brassica carinata
BolC6t39073H Brassica oleracea
BraA07t30972Z Brassica rapa
C06p39850 Brassica napus
CAN.G625.81 Capsicum annuum
CANSAT78G2192 Cannabis sativa
CARHR058490 Cardamine hirsuta
Carub.0002s1253 Capsella rubella
Ca_05861_v3 Cicer arietinum L.
Ca_05868_v3 Cicer arietinum L.
Ca_05898_v3 Cicer arietinum L.
CBR_g28641 Chara braunii
Cc07_g08220 Coffea canephora
CDE04G0829 Ceratophyllum demersum
Cfa007855 Carpinus fangiana
Ciclev10011939m.g Citrus clementina
CiPaw.04G045800 Carya illinoinensis
ClCG05G010860 Citrullus lanatus
COL.COLO4_15704 Corchorus olitorius
Cpa.g.sc116.20 Carica papaya
Cpa.g.sc116.21 Carica papaya
Cre05.g244750 Chlamydomonas reinhardtii
CsaV3_1G043810 Cucumis sativus L.
CSS0023678 Camellia sinensis var. sinensis
DCAR_022460 Daucus carota
Dinv19005 Davidia involucrata
Duzib211G0581 Durio zibethinus
ECA232G3521 Erigeron canadensis
EL10Ac2g04489 Beta vulgaris
Eucgr.F02817 Eucalyptus grandis
FAN19G0538 Fragaria x ananassa
FAN28G0504 Fragaria x ananassa
FAN28G1150 Fragaria x ananassa
FAN28G2473 Fragaria x ananassa
FvH4_1g30040 Fragaria vesca
Glyma.02G247400 Glycine max
Glyma.14G068800 Glycine max
Gohir.A07G193350 Gossypium hirsutum
Gohir.A08G052800 Gossypium hirsutum
Gohir.A08G229450 Gossypium hirsutum
Gohir.A09G155300 Gossypium hirsutum
Gohir.A10G143300 Gossypium hirsutum
Gohir.A12G000900 Gossypium hirsutum
Gohir.D02G126132 Gossypium hirsutum
Gohir.D02G177580 Gossypium hirsutum
Gohir.D03G005233 Gossypium hirsutum
Gohir.D04G118901 Gossypium hirsutum
Gohir.D06G126066 Gossypium hirsutum
Gohir.D08G062400 Gossypium hirsutum
Gohir.D10G126550 Gossypium hirsutum
Gorai.003G061900 Gossypium raimondii
Gorai.004G064600 Gossypium raimondii
Gorai.004G103000 Gossypium raimondii
Gorai.007G247100 Gossypium raimondii
Gorai.010G146900 Gossypium raimondii
Gorai.012G115800 Gossypium raimondii
GSVIVG01030877001 Vitis vinifera
HanXRQChr11g0325221 Helianthus annuus
Hund13689 Selenicereus undatus
Lalb_Chr04g0249391 Lupinus albus
Lalb_Chr04g0251281 Lupinus albus
Lj4A178G42 Lonicera japonica
LjContig00141g0005291 Lotus japonicus
Lsat_1_v5_gn_4_154740 Lactuca sativa
Manes.01G115300 Manihot esculenta
Mapoly0209s0005 Marchantia polymorpha
MBI16_g05920_MAGBIO Magnolia biondii
MD09G1261000 Malus domestica
Medtr5g079770 Medicago truncatula
MELO3C020300.2 Cucumis melo
Migut.L00470 Erythranthe guttata
MSTRG.3529 Avicennia marina
Nitab4.5_0002248g0030 Nicotiana tabacum
Nitab4.5_0004399g0050 Nicotiana tabacum
Nn3g18196 Nelumbo nucifera
Oeu047421.1 Olea europaea
Os04g0132300 Oryza sativa ssp. japonica
Peaxi162Scf00803g00527 Petunia axillaris
PGR004G1192 Punica granatum
PGSC0003DMG400030643 Solanum tuberosum
Phvul.008G233500 Phaseolus vulgaris
Potri.017G123900 Populus trichocarpa
Pp3c15_1450 Physcomitrium patens
PRCOL_00001496 Prasinoderma coloniale
Prupe.3G158200 Prunus persica
Psat2g045240 Pisum sativum
PSO017G6098 Papaver somniferum
QL11p004025 Quercus lobata
QL11p004209 Quercus lobata
QL11p004257 Quercus lobata
QL11p004402 Quercus lobata
QL11p004418 Quercus lobata
RcHm_v2.0_Chr3g0492101 Rosa chinensis
Rhsim10G0079100 Rhododendron simsii
Sabra17G0102100 Salix brachista
Sabra17G0104800 Salix brachista
SalBow7G0143 Salvia bowleyana
Sc11g0008590 Simmondsia chinensis
Sed0021694 Sechium edule
SEGI_13453 Sequoiadendron giganteum
SEGI_27826 Sequoiadendron giganteum
SEGI_34356 Sequoiadendron giganteum
SGA_v2.0_scaffold329G48866 Striga asiatica
SMO196G0007 Selaginella moellendorffii
Solyc02g091330.4 Solanum lycopersicum
Sopen02g035950 Solanum pennellii
Sp5g21560 Schrenkiella parvula
TAR371G0457 Trochodendron aralioides
THA.LOC104805600 Tarenaya hassleriana
Thecc.04G122200 Theobroma cacao
Thhalv10018669m.g Eutrema salsugineum
TPR.G15212 Trifolium pratense
TPR.G18743 Trifolium pratense
TPR.G22657 Trifolium pratense
TPR.G25728 Trifolium pratense
TPR.G3463 Trifolium pratense
TPR.G3477 Trifolium pratense
TPR.G3492 Trifolium pratense
TPR.G3505 Trifolium pratense
TPR.G39323 Trifolium pratense
TPR.G4379 Trifolium pratense
TPR.G5666 Trifolium pratense
TWI74G1499 Tripterygium wilfordii
unitig_32.g11881 Utricularia gibba
vmacro05501 Vaccinium macrocarpon
VMungo0464G1199 Vigna mungo
VMungo0647G1217 Vigna mungo
Zm00001eb088880 Zea mays

User provided reference genes

Program Settings