Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p17400 Brassica napus
A09p43940 Brassica napus
Aa31LG1G15110 Aethionema arabicum
Actinidia19142 Actinidia chinensis
Actinidia19143 Actinidia chinensis
Actinidia30988 Actinidia chinensis
AL1G50140 Arabidopsis lyrata
AL3G20580 Arabidopsis lyrata
AL5G31170 Arabidopsis lyrata
AL8G26440 Arabidopsis lyrata
AL8G44960 Arabidopsis lyrata
Aqoxy5G01747 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4J2790 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JHI2JM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P7J5GP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U17G7A Arachis hypogaea
AT3G50840 Arabidopsis thaliana
AT5G66560 Arabidopsis thaliana
ATR0733G094 Amborella trichopoda
Atru.chr3.474 Acer truncatum
Atru.chr3.475 Acer truncatum
AUR62003231 Chenopodium quinoa
AUR62027243 Chenopodium quinoa
BcaB01g00576 Brassica carinata
BcaB02g10014 Brassica carinata
BcaC06g34718 Brassica carinata
BcaC07g39548 Brassica carinata
BolC7t43055H Brassica oleracea
BolC8t50222H Brassica oleracea
BraA07t29462Z Brassica rapa
BraA09t39851Z Brassica rapa
C07p25310 Brassica napus
C08p26040 Brassica napus
CAN.G836.18 Capsicum annuum
CANSAT01G3058 Cannabis sativa
CARHR160380 Cardamine hirsuta
CARHR281180 Cardamine hirsuta
Carub.0005s1722 Capsella rubella
Carub.0008s2795 Capsella rubella
Ca_22224_v3 Cicer arietinum L.
Cc07_g05370 Coffea canephora
CDE04G1905 Ceratophyllum demersum
CDE07G0095 Ceratophyllum demersum
Cfa004234 Carpinus fangiana
Ciclev10025132m.g Citrus clementina
CiPaw.01G029400 Carya illinoinensis
ClCG01G016390 Citrullus lanatus
COL.COLO4_22176 Corchorus olitorius
Cpa.g.sc15.58 Carica papaya
CsaV3_6G042700 Cucumis sativus L.
CSS0025490 Camellia sinensis var. sinensis
CSS0025896 Camellia sinensis var. sinensis
CSS0039468 Camellia sinensis var. sinensis
CSS0042436 Camellia sinensis var. sinensis
DCAR_025669 Daucus carota
Dinv26778 Davidia involucrata
Dinv39925 Davidia involucrata
Duzib187G1798 Durio zibethinus
Duzib264G0705 Durio zibethinus
ECA246G2035 Erigeron canadensis
EL10Ac6g14848 Beta vulgaris
Eucgr.H01939 Eucalyptus grandis
FAN19G2155 Fragaria x ananassa
FAN23G0793 Fragaria x ananassa
FAN26G1789 Fragaria x ananassa
FAN28G2235 Fragaria x ananassa
FvH4_1g14470 Fragaria vesca
Glyma.02G061400 Glycine max
Glyma.11G061200 Glycine max
Glyma.16G143800 Glycine max
Gohir.A02G161700 Gossypium hirsutum
Gohir.D03G018800 Gossypium hirsutum
Gorai.003G019200 Gossypium raimondii
GSVIVG01003773001 Vitis vinifera
HanXRQChr12g0378451 Helianthus annuus
HanXRQChr15g0489611 Helianthus annuus
Haze_15163 Corylus avellana
Hma1.2p1_0739F.1_g211270 Hydrangea macrophylla
HPP92_018818 Vanilla planifolia
HPP92_018819 Vanilla planifolia
Hund14121 Selenicereus undatus
Hund16565 Selenicereus undatus
Lalb_Chr05g0227131 Lupinus albus
Lalb_Chr09g0322841 Lupinus albus
Lj2g0019832 Lotus japonicus
Lj4A135T69 Lonicera japonica
Lj4g0020562 Lotus japonicus
Lsat_1_v5_gn_3_93941 Lactuca sativa
Lsat_1_v5_gn_4_177360 Lactuca sativa
Manes.12G097500 Manihot esculenta
Manes.13G132400 Manihot esculenta
MBI16_g29182_MAGBIO Magnolia biondii
MD02G1158300 Malus domestica
MD15G1273100 Malus domestica
Medtr8g078900 Medicago truncatula
MELO3C007509.2 Cucumis melo
Migut.H00503 Erythranthe guttata
MSTRG.23806 Avicennia marina
Nitab4.5_0000108g0160 Nicotiana tabacum
Nitab4.5_0005594g0010 Nicotiana tabacum
Nn5g29430 Nelumbo nucifera
Nn6g32167 Nelumbo nucifera
Oeu003957.1 Olea europaea
Oeu032919.1 Olea europaea
Oeu043819.1 Olea europaea
Os03g0738900 Oryza sativa ssp. japonica
Os03g0767600 Oryza sativa ssp. japonica
Peaxi162Scf00535g00616 Petunia axillaris
PGR102G0911 Punica granatum
PGSC0003DMG400010034 Solanum tuberosum
Phvul.002G023900 Phaseolus vulgaris
Phvul.003G249600 Phaseolus vulgaris
Potri.005G130700 Populus trichocarpa
Potri.007G033900 Populus trichocarpa
Prupe.7G145600 Prunus persica
Psat4g091600 Pisum sativum
PSO170G6687 Papaver somniferum
PSO700G0158 Papaver somniferum
QL06p044273 Quercus lobata
RcHm_v2.0_Chr2g0103231 Rosa chinensis
Rhsim08G0109500 Rhododendron simsii
Sabra05G0105900 Salix brachista
Sabra07G0029700 Salix brachista
SalBow1G1322 Salvia bowleyana
Sc16g0001190 Simmondsia chinensis
Sed0012452 Sechium edule
SGA_v2.0_scaffold15G07202 Striga asiatica
Solyc02g090070.3 Solanum lycopersicum
Sopen02g034770 Solanum pennellii
Sp2g30150 Schrenkiella parvula
Sp5g11380 Schrenkiella parvula
TAR381G0327 Trochodendron aralioides
TAR628G1141 Trochodendron aralioides
THA.LOC104826733 Tarenaya hassleriana
Thecc.01G045500 Theobroma cacao
Thhalv10003788m.g Eutrema salsugineum
Thhalv10010316m.g Eutrema salsugineum
TPR.G11253 Trifolium pratense
TWI09G0134 Tripterygium wilfordii
vmacro17879 Vaccinium macrocarpon
VMungo0251G2652 Vigna mungo
VMungo0647G1095 Vigna mungo
VMungo1215G0438 Vigna mungo
Zm00001eb056580 Zea mays
Zm00001eb213970 Zea mays

User provided reference genes

Program Settings