Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p34660 Brassica napus
A06p41830 Brassica napus
Aa31LG2G5890 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2741 Anthoceros agrestis
Actinidia19542 Actinidia chinensis
Actinidia37709 Actinidia chinensis
AL5G15510 Arabidopsis lyrata
Aqoxy271s005 Aquilegia oxysepala
Aqoxy271s006 Aquilegia oxysepala
Aqoxy5G03000 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1F18R3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3E1BT5 Arachis hypogaea
AT3G26670 Arabidopsis thaliana
ATR0582G225 Amborella trichopoda
Atru.chr1.2008 Acer truncatum
Atru.chr6.2724 Acer truncatum
AUR62017468 Chenopodium quinoa
AUR62032536 Chenopodium quinoa
BcaB07g30221 Brassica carinata
BcaB07g30223 Brassica carinata
BcaC03g17377 Brassica carinata
BcaC06g31051 Brassica carinata
BolC2t11394H Brassica oleracea
BolC7t44090H Brassica oleracea
BraA02t08474Z Brassica rapa
BraA06t27102Z Brassica rapa
C02p53220 Brassica napus
C07p35690 Brassica napus
CAN.G1393.18 Capsicum annuum
CAN.G473.165 Capsicum annuum
CANSAT64G2474 Cannabis sativa
CARHR147680 Cardamine hirsuta
Carub.0005s0467 Capsella rubella
Ca_04509_v3 Cicer arietinum L.
CBR_g40440 Chara braunii
Cc07_g01420 Coffea canephora
CDE02G1303 Ceratophyllum demersum
CDE06G1855 Ceratophyllum demersum
Cfa007139 Carpinus fangiana
Cfa007634 Carpinus fangiana
Ciclev10015243m.g Citrus clementina
CiPaw.04G000200 Carya illinoinensis
ClCG05G012480 Citrullus lanatus
COL.COLO4_13402 Corchorus olitorius
Cpa.g.sc70.39 Carica papaya
Cre08.g358400 Chlamydomonas reinhardtii
Cre12.g523100 Chlamydomonas reinhardtii
CsaV3_3G020050 Cucumis sativus L.
CSS0012528 Camellia sinensis var. sinensis
CSS0013787 Camellia sinensis var. sinensis
DCAR_014318 Daucus carota
Dinv33260 Davidia involucrata
Duzib147G0914 Durio zibethinus
Duzib264G1200 Durio zibethinus
ECA238G3366 Erigeron canadensis
EL10Ac6g13903 Beta vulgaris
Eucgr.I01571 Eucalyptus grandis
FAN02G3871 Fragaria x ananassa
FAN02G3991 Fragaria x ananassa
FAN05G2324 Fragaria x ananassa
FAN09G0696 Fragaria x ananassa
FAN14G5400 Fragaria x ananassa
FvH4_6g54450 Fragaria vesca
Glyma.02G068000 Glycine max
Glyma.16G149500 Glycine max
Gohir.A11G061900 Gossypium hirsutum
Gohir.D11G065800 Gossypium hirsutum
Gohir.D11G065866 Gossypium hirsutum
Gorai.007G071300 Gossypium raimondii
GSVIVG01032952001 Vitis vinifera
HanXRQChr07g0197991 Helianthus annuus
HanXRQChr14g0451551 Helianthus annuus
Haze_14979 Corylus avellana
Haze_14984 Corylus avellana
Hma1.2p1_0421F.1_g149890 Hydrangea macrophylla
HPP92_009749 Vanilla planifolia
HPP92_009766 Vanilla planifolia
HPP92_021581 Vanilla planifolia
Hund04137 Selenicereus undatus
Lalb_Chr02g0156931 Lupinus albus
Lalb_Chr21g0316981 Lupinus albus
Lj2g0020206 Lotus japonicus
Lj7A619T48 Lonicera japonica
Lsat_1_v5_gn_8_141180 Lactuca sativa
Lsat_1_v5_gn_8_91301 Lactuca sativa
Manes.04G097200 Manihot esculenta
Manes.11G073500 Manihot esculenta
Mapoly0166s0011 Marchantia polymorpha
MBI11_g30566_MAGBIO Magnolia biondii
MD09G1001000 Malus domestica
MD17G1004100 Malus domestica
Medtr6g033100 Medicago truncatula
MELO3C014760.2 Cucumis melo
Migut.F00002 Erythranthe guttata
MSTRG.3035 Avicennia marina
Nitab4.5_0000519g0340 Nicotiana tabacum
Nitab4.5_0002901g0090 Nicotiana tabacum
Nitab4.5_0003951g0020 Nicotiana tabacum
Nn3g16211 Nelumbo nucifera
Nn4g22078 Nelumbo nucifera
Nn6g33393 Nelumbo nucifera
Oeu050153.1 Olea europaea
Os02g0518100 Oryza sativa ssp. japonica
Peaxi162Scf00058g00033 Petunia axillaris
Peaxi162Scf00420g00913 Petunia axillaris
Peaxi162Scf00420g00931 Petunia axillaris
PGR142G3265 Punica granatum
PGSC0003DMG400025244 Solanum tuberosum
PGSC0003DMG401020232 Solanum tuberosum
Phvul.004G068100 Phaseolus vulgaris
Potri.014G139700 Populus trichocarpa
Pp3c3_36320 Physcomitrium patens
Pp3c8_3640 Physcomitrium patens
Prupe.3G315100 Prunus persica
Psat1g014640 Pisum sativum
PSO017G6847 Papaver somniferum
PSO478G3167 Papaver somniferum
QL02p068558 Quercus lobata
RcHm_v2.0_Chr2g0176711 Rosa chinensis
Rhsim08G0037600 Rhododendron simsii
Sabra14G0105400 Salix brachista
SalBow4G0739 Salvia bowleyana
Sc16g0004200 Simmondsia chinensis
Sed0011932 Sechium edule
SEGI_21160 Sequoiadendron giganteum
SEGI_40793 Sequoiadendron giganteum
SGA_v2.0_scaffold44G16957 Striga asiatica
SMO266G0026 Selaginella moellendorffii
Solyc01g086730.4 Solanum lycopersicum
Sopen01g033730 Solanum pennellii
Sp2g15790 Schrenkiella parvula
TAR622G0174 Trochodendron aralioides
THA.LOC104805296 Tarenaya hassleriana
THA.LOC104824001 Tarenaya hassleriana
Thecc.04G051300 Theobroma cacao
Thhalv10004224m.g Eutrema salsugineum
TPR.G6109 Trifolium pratense
TWI60G0175 Tripterygium wilfordii
vmacro18402 Vaccinium macrocarpon
vmacro18403 Vaccinium macrocarpon
VMungo0464G1810 Vigna mungo
Zm00001eb060310 Zea mays
Zm00001eb180680 Zea mays
Zm00001eb242230 Zea mays
Zm00001eb393410 Zea mays

User provided reference genes

Program Settings