Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p03820 Brassica napus
A08p03840 Brassica napus
Aa31LG10G4060 Aethionema arabicum
Aa31LG10G4460 Aethionema arabicum
Actinidia14925 Actinidia chinensis
Actinidia16687 Actinidia chinensis
Actinidia16688 Actinidia chinensis
Ah.03g138470 Amaranthus hybridus
AL1G56890 Arabidopsis lyrata
Aqoxy3G04030 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.HFR8A2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I79V4W Arachis hypogaea
AT1G49540 Arabidopsis thaliana
ATR0759G035 Amborella trichopoda
Atru.chr11.243 Acer truncatum
AUR62002806 Chenopodium quinoa
AUR62014113 Chenopodium quinoa
BcaB02g11086 Brassica carinata
BcaB04g17325 Brassica carinata
BcaB07g33669 Brassica carinata
BcaC07g37033 Brassica carinata
BcaC08g43144 Brassica carinata
BolC6t35550H Brassica oleracea
BolC8t47194H Brassica oleracea
BolC8t47195H Brassica oleracea
BraA06t23589Z Brassica rapa
BraA08t32412Z Brassica rapa
BraA08t32413Z Brassica rapa
C06p04260 Brassica napus
C08p04020 Brassica napus
C08p04030 Brassica napus
CANSAT01G1665 Cannabis sativa
CARHR039570 Cardamine hirsuta
Carub.0001s3872 Capsella rubella
Ca_06893_v3 Cicer arietinum L.
Cc11_g09620 Coffea canephora
CDE06G0233 Ceratophyllum demersum
Cfa023883 Carpinus fangiana
Ciclev10014261m.g Citrus clementina
CiPaw.05G242900 Carya illinoinensis
ClCG05G022460 Citrullus lanatus
COL.COLO4_32126 Corchorus olitorius
COL.COLO4_32127 Corchorus olitorius
Cpa.g.sc65.71 Carica papaya
Cre10.g462750 Chlamydomonas reinhardtii
CsaV3_5G034620 Cucumis sativus L.
CSS0022436 Camellia sinensis var. sinensis
CSS0034119 Camellia sinensis var. sinensis
DCAR_007266 Daucus carota
Dinv16141 Davidia involucrata
Dinv31589 Davidia involucrata
Dinv31590 Davidia involucrata
Dinv31591 Davidia involucrata
Duzib248G1599 Durio zibethinus
ECA233G5272 Erigeron canadensis
EL10Ac6g14300 Beta vulgaris
Eucgr.G02236 Eucalyptus grandis
FAN07G0368 Fragaria x ananassa
FAN12G0536 Fragaria x ananassa
FAN12G3194 Fragaria x ananassa
FAN17G1054 Fragaria x ananassa
FAN22G2325 Fragaria x ananassa
FvH4_4g26660 Fragaria vesca
Glyma.10G270300 Glycine max
Glyma.20G121000 Glycine max
Gohir.A10G178200 Gossypium hirsutum
Gohir.D10G184801 Gossypium hirsutum
Gorai.011G207200 Gossypium raimondii
GSVIVG01011835001 Vitis vinifera
HanXRQChr08g0213241 Helianthus annuus
Haze_00658 Corylus avellana
HPP92_023439 Vanilla planifolia
HPP92_023440 Vanilla planifolia
Hund20741 Selenicereus undatus
Lalb_Chr06g0165831 Lupinus albus
Lj3A879T38 Lonicera japonica
Lj5g0019473 Lotus japonicus
Lsat_1_v5_gn_8_42541 Lactuca sativa
Manes.14G107300 Manihot esculenta
Mapoly0064s0032 Marchantia polymorpha
MBI09_g25150_MAGBIO Magnolia biondii
MCO16G399 Micromonas commoda
MD07G1141900 Malus domestica
MD07G1142000 Malus domestica
MD13G1035000 Malus domestica
MD16G1036900 Malus domestica
Medtr1g109490 Medicago truncatula
MELO3C012277.2 Cucumis melo
Migut.E00376 Erythranthe guttata
MSTRG.2215 Avicennia marina
Nitab4.5_0000694g0070 Nicotiana tabacum
Nitab4.5_0002112g0120 Nicotiana tabacum
Nn4g23964 Nelumbo nucifera
Oeu048367.1 Olea europaea
Os08g0493900 Oryza sativa ssp. japonica
Peaxi162Scf00179g00544 Petunia axillaris
PGR119G1728 Punica granatum
PGSC0003DMG400024407 Solanum tuberosum
PGSC0003DMG400025502 Solanum tuberosum
PGSC0003DMG400031444 Solanum tuberosum
Phvul.007G032400 Phaseolus vulgaris
Potri.010G119600 Populus trichocarpa
Prupe.1G317200 Prunus persica
Psat6g224120 Pisum sativum
PSO063G7634 Papaver somniferum
PSO782G5688 Papaver somniferum
QL01p010697 Quercus lobata
QL01p010772 Quercus lobata
RcHm_v2.0_Chr4g0434371 Rosa chinensis
RcHm_v2.0_Chr7g0200531 Rosa chinensis
RcHm_v2.0_Chr7g0200991 Rosa chinensis
Rhsim09G0103500 Rhododendron simsii
Sabra10G0090000 Salix brachista
SalBow8G2488 Salvia bowleyana
Sc04g0005990 Simmondsia chinensis
Sed0004719 Sechium edule
Sed0022508 Sechium edule
SEGI_09159 Sequoiadendron giganteum
SEGI_12856 Sequoiadendron giganteum
SEGI_19116 Sequoiadendron giganteum
SEGI_20231 Sequoiadendron giganteum
SGA_v2.0_scaffold170G38808 Striga asiatica
SHI16242 Sapria himalayana
SMO364G0112 Selaginella moellendorffii
Solyc06g008310.3 Solanum lycopersicum
Sopen06g003160 Solanum pennellii
Sp1g36390 Schrenkiella parvula
Sp1g36410 Schrenkiella parvula
TAR371G0141 Trochodendron aralioides
TAR371G0254 Trochodendron aralioides
TAR371G0924 Trochodendron aralioides
TAR371G0959 Trochodendron aralioides
TAR371G1015 Trochodendron aralioides
TAR371G1111 Trochodendron aralioides
THA.LOC104811357 Tarenaya hassleriana
Thecc.02G221200 Theobroma cacao
Thhalv10011237m.g Eutrema salsugineum
TPR.G18842 Trifolium pratense
TPR.G18855 Trifolium pratense
TWI31G0370 Tripterygium wilfordii
unitig_699.g19525 Utricularia gibba
vmacro10603 Vaccinium macrocarpon
vmacro10604 Vaccinium macrocarpon
VMungo0720G3109 Vigna mungo
Zm00001eb033820 Zea mays

User provided reference genes

Program Settings