Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p31790 Brassica napus
A05p02560 Brassica napus
Aa31LG1G23830 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1681 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.1682 Anthoceros agrestis
Actinidia17238 Actinidia chinensis
Actinidia38549 Actinidia chinensis
Ah.04g151740 Amaranthus hybridus
AL4G40140 Arabidopsis lyrata
Aqoxy1G00290 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5W3L9W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UFK0LP Arachis hypogaea
AT2G41820 Arabidopsis thaliana
ATR0332G030 Amborella trichopoda
Atru.chr1.1079 Acer truncatum
AUR62024439 Chenopodium quinoa
AUR62026030 Chenopodium quinoa
BcaB06g29204 Brassica carinata
BcaC02g12490 Brassica carinata
BcaNung02839 Brassica carinata
BolC4t21943H Brassica oleracea
BolC4t28419H Brassica oleracea
BraA04t18637Z Brassica rapa
BraA05t19249Z Brassica rapa
C04p03020 Brassica napus
C04p69200 Brassica napus
CAN.G1167.5 Capsicum annuum
CAN.G641.19 Capsicum annuum
CAN.G676.58 Capsicum annuum
CANSAT80G1208 Cannabis sativa
CANSAT80G2170 Cannabis sativa
CARHR136900 Cardamine hirsuta
Carub.0004s2409 Capsella rubella
Ca_08462_v3 Cicer arietinum L.
Cc06_g16710 Coffea canephora
Cfa016826 Carpinus fangiana
Ciclev10004299m.g Citrus clementina
CiPaw.09G037600 Carya illinoinensis
CiPaw.10G032900 Carya illinoinensis
ClCG03G009970 Citrullus lanatus
ClCG04G000070 Citrullus lanatus
COL.COLO4_28247 Corchorus olitorius
Cpa.g.sc92.45 Carica papaya
CsaV3_4G011750 Cucumis sativus L.
CSS0039442 Camellia sinensis var. sinensis
CSS0047305 Camellia sinensis var. sinensis
DCAR_009060 Daucus carota
Dinv12473 Davidia involucrata
Dinv18059 Davidia involucrata
Dinv24989 Davidia involucrata
Duzib106G0112 Durio zibethinus
Duzib128G1383 Durio zibethinus
ECA248G1137 Erigeron canadensis
EL10Ac3g07080 Beta vulgaris
Eucgr.K01750 Eucalyptus grandis
Eucgr.K01804 Eucalyptus grandis
FAN02G0667 Fragaria x ananassa
FAN05G0507 Fragaria x ananassa
FAN05G5246 Fragaria x ananassa
FAN09G2610 Fragaria x ananassa
FAN14G0702 Fragaria x ananassa
FvH4_6g23640 Fragaria vesca
Glyma.03G137300 Glycine max
Glyma.19G140100 Glycine max
Gohir.A02G108000 Gossypium hirsutum
Gohir.A09G122700 Gossypium hirsutum
Gohir.D03G068200 Gossypium hirsutum
Gohir.D09G118700 Gossypium hirsutum
Gohir.D09G119700 Gossypium hirsutum
Gorai.003G092400 Gossypium raimondii
Gorai.006G137100 Gossypium raimondii
GSVIVG01033288001 Vitis vinifera
HanXRQChr01g0009191 Helianthus annuus
HanXRQChr13g0395761 Helianthus annuus
Haze_19870 Corylus avellana
HPP92_010138 Vanilla planifolia
Hund19152 Selenicereus undatus
Lalb_Chr25g0287311 Lupinus albus
Lj1g0025075 Lotus japonicus
Lju124A40T71 Lonicera japonica
Lsat_1_v5_gn_5_161480 Lactuca sativa
Manes.08G050300 Manihot esculenta
Manes.09G022300 Manihot esculenta
Mapoly0042s0061 Marchantia polymorpha
MBI02_g23140_MAGBIO Magnolia biondii
MBI04_g34428_MAGBIO Magnolia biondii
MD12G1076900 Malus domestica
MD14G1071100 Malus domestica
Medtr7g091680 Medicago truncatula
MELO3C023128.2 Cucumis melo
Migut.K00086 Erythranthe guttata
MSTRG.10818 Avicennia marina
MSTRG.19862 Avicennia marina
MSTRG.26120 Avicennia marina
Nitab4.5_0000082g0090 Nicotiana tabacum
Nitab4.5_0000608g0090 Nicotiana tabacum
Nitab4.5_0000733g0070 Nicotiana tabacum
Nitab4.5_0009344g0050 Nicotiana tabacum
Nn2g15269 Nelumbo nucifera
Oeu000825.1 Olea europaea
Oeu008151.1 Olea europaea
Os07g0207100 Oryza sativa ssp. japonica
Peaxi162Scf00003g00403 Petunia axillaris
Peaxi162Scf00493g00114 Petunia axillaris
PGR142G4432 Punica granatum
PGSC0003DMG400008146 Solanum tuberosum
PGSC0003DMG401027271 Solanum tuberosum
Phvul.001G134600 Phaseolus vulgaris
Potri.006G051700 Populus trichocarpa
Potri.016G055400 Populus trichocarpa
Prupe.7G063100 Prunus persica
Psat3g072480 Pisum sativum
PSO339G2403 Papaver somniferum
QL07p000179 Quercus lobata
RcHm_v2.0_Chr3g0482081 Rosa chinensis
Rhsim04G0102200 Rhododendron simsii
Sabra06G0036300 Salix brachista
Sabra16G0058100 Salix brachista
SalBow1G6869 Salvia bowleyana
SalBow6G3732 Salvia bowleyana
Sc19g0006800 Simmondsia chinensis
Sc25g0005290 Simmondsia chinensis
Sed0005549 Sechium edule
SGA_v2.0_scaffold105G30413 Striga asiatica
SGA_v2.0_scaffold273G46439 Striga asiatica
SGA_v2.0_scaffold94G28480 Striga asiatica
Solyc04g015600.3 Solanum lycopersicum
Solyc10g079170.2 Solanum lycopersicum
Sopen04g007680 Solanum pennellii
Sopen10g029820 Solanum pennellii
Sp4g24080 Schrenkiella parvula
TAR623G1597 Trochodendron aralioides
TAR633G2294 Trochodendron aralioides
TAR636G2447 Trochodendron aralioides
THA.LOC104818617 Tarenaya hassleriana
THA.LOC104824445 Tarenaya hassleriana
Thecc.05G157100 Theobroma cacao
Thhalv10016216m.g Eutrema salsugineum
TPR.G3736 Trifolium pratense
TWI77G0403 Tripterygium wilfordii
vmacro09079 Vaccinium macrocarpon
VMungo0720G2518 Vigna mungo
VMungo1383G3413 Vigna mungo
Zm00001eb095370 Zea mays
Zm00001eb303060 Zea mays

User provided reference genes

Program Settings