Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p09330 Brassica napus
Aa31LG1G2400 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_369.586 Anthoceros agrestis
Actinidia05188 Actinidia chinensis
Actinidia27450 Actinidia chinensis
AL1G23510 Arabidopsis lyrata
Aqoxy7G00723 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9F7ELE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VW53Z5 Arachis hypogaea
AT1G12230 Arabidopsis thaliana
ATR1152G004 Amborella trichopoda
Atru.chr9.1379_Atru.chr9.1380 Acer truncatum
Atru.chr9.1382 Acer truncatum
Atru.chr9.1383 Acer truncatum
AUR62007475 Chenopodium quinoa
AUR62039933 Chenopodium quinoa
BcaC05g25195 Brassica carinata
BolC5t29844H Brassica oleracea
BraA06t24120Z Brassica rapa
C05p11010 Brassica napus
CAN.G1488.1 Capsicum annuum
CAN.G605.8 Capsicum annuum
CANSAT21G2027 Cannabis sativa
CARHR012530 Cardamine hirsuta
Carub.0001s1190 Capsella rubella
Ca_25339_v3 Cicer arietinum L.
CBR_g37411 Chara braunii
Cc08_g12920 Coffea canephora
CDE04G1696 Ceratophyllum demersum
CDE04G2727 Ceratophyllum demersum
CDE12G0422 Ceratophyllum demersum
Ciclev10020501m.g Citrus clementina
CiPaw.11G150400 Carya illinoinensis
ClCG01G003850 Citrullus lanatus
COL.COLO4_37215 Corchorus olitorius
Cpa.g.sc29.127 Carica papaya
Cre01.g032650 Chlamydomonas reinhardtii
Cre14.g630835 Chlamydomonas reinhardtii
Cre14.g630847 Chlamydomonas reinhardtii
CsaV3_5G003980 Cucumis sativus L.
CSS0023019 Camellia sinensis var. sinensis
CSS0046114 Camellia sinensis var. sinensis
DCAR_004923 Daucus carota
DCAR_006814 Daucus carota
Dinv21601 Davidia involucrata
Duzib068G0557 Durio zibethinus
Duzib205G1833 Durio zibethinus
ECA240G0014 Erigeron canadensis
EL10Ac5g13010 Beta vulgaris
Eucgr.D02030 Eucalyptus grandis
FAN03G2731 Fragaria x ananassa
FAN04G2435 Fragaria x ananassa
FAN04G3018 Fragaria x ananassa
FAN08G1405 Fragaria x ananassa
FAN10G1808 Fragaria x ananassa
FAN11G3467 Fragaria x ananassa
FAN12G3953 Fragaria x ananassa
FAN13G2928 Fragaria x ananassa
FAN17G0911 Fragaria x ananassa
FAN18G1040 Fragaria x ananassa
FAN21G1940 Fragaria x ananassa
FAN23G0587 Fragaria x ananassa
FAN23G0611 Fragaria x ananassa
FAN23G1777 Fragaria x ananassa
FAN26G2512 Fragaria x ananassa
FAN28G1011 Fragaria x ananassa
FvH4_5g00280 Fragaria vesca
Glyma.05G056400 Glycine max
Glyma.17G138600 Glycine max
Gohir.A03G010000 Gossypium hirsutum
Gohir.A09G195500 Gossypium hirsutum
Gohir.D03G160700 Gossypium hirsutum
Gohir.D09G190100 Gossypium hirsutum
Gorai.003G169200 Gossypium raimondii
Gorai.006G212700 Gossypium raimondii
Gorai.N027100 Gossypium raimondii
GSVIVG01001274001 Vitis vinifera
GSVIVG01004774001 Vitis vinifera
GSVIVG01028518001 Vitis vinifera
HanXRQChr03g0087851 Helianthus annuus
Haze_07851 Corylus avellana
Hma1.2p1_1414F.1_g281890 Hydrangea macrophylla
HPP92_022434 Vanilla planifolia
Lalb_Chr05g0225581 Lupinus albus
Lj2A211T58 Lonicera japonica
Lj4g0020394 Lotus japonicus
Lsat_1_v5_gn_6_90321 Lactuca sativa
Manes.01G076600 Manihot esculenta
Mapoly0029s0029 Marchantia polymorpha
Mapoly0029s0033 Marchantia polymorpha
MBI03_g13472_MAGBIO Magnolia biondii
MBI04_g37584_MAGBIO Magnolia biondii
MBI14_g06401_MAGBIO Magnolia biondii
MCO13G140 Micromonas commoda
MD06G1067000 Malus domestica
Medtr4g101620 Medicago truncatula
MELO3C005559.2 Cucumis melo
Migut.E01048 Erythranthe guttata
MSTRG.25537 Avicennia marina
Nitab4.5_0000993g0070 Nicotiana tabacum
Nitab4.5_0009175g0010 Nicotiana tabacum
Oeu038010.1 Olea europaea
Os08g0154300 Oryza sativa ssp. japonica
Peaxi162Scf00002g00815 Petunia axillaris
PGR031G3926 Punica granatum
PGSC0003DMG400004791 Solanum tuberosum
Phvul.003G218000 Phaseolus vulgaris
Potri.001G120400 Populus trichocarpa
Pp3c15_6350 Physcomitrium patens
PRCOL_00004111 Prasinoderma coloniale
PRCOL_00004269 Prasinoderma coloniale
Prupe.5G075500 Prunus persica
Psat4g070360 Pisum sativum
Psat5g232960 Pisum sativum
Psat5g235160 Pisum sativum
PSO017G6911 Papaver somniferum
PSO170G6680 Papaver somniferum
QL12p013868 Quercus lobata
RcHm_v2.0_Chr6g0254981 Rosa chinensis
RcHm_v2.0_Chr6g0270571 Rosa chinensis
RcHm_v2.0_Chr7g0202331 Rosa chinensis
Rhsim07G0104300 Rhododendron simsii
Sabra01G0092800 Salix brachista
SalBow1G0839 Salvia bowleyana
SalBow1G3426 Salvia bowleyana
SalBow1G5553 Salvia bowleyana
Sc01g0009340 Simmondsia chinensis
Sed0011689 Sechium edule
Sed0019529 Sechium edule
SEGI_03700 Sequoiadendron giganteum
SEGI_05849 Sequoiadendron giganteum
SEGI_36758 Sequoiadendron giganteum
Solyc08g079070.2 Solanum lycopersicum
Sopen08g027530 Solanum pennellii
Sp1g10840 Schrenkiella parvula
TAR629G2769 Trochodendron aralioides
THA.LOC104809459 Tarenaya hassleriana
Thecc.03G257000 Theobroma cacao
Thhalv10007790m.g Eutrema salsugineum
TPR.G37612 Trifolium pratense
TWI81G0718 Tripterygium wilfordii
unitig_0.g1234 Utricularia gibba
vmacro14106 Vaccinium macrocarpon
VMungo0251G3554 Vigna mungo
Zm00001eb172680 Zea mays

User provided reference genes

Program Settings