Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p11610 Brassica napus
Aa31LG9G16930 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_369.363 Anthoceros agrestis
Actinidia18107 Actinidia chinensis
Actinidia36292 Actinidia chinensis
Ah.08g217340 Amaranthus hybridus
Ah.15g094970 Amaranthus hybridus
AL7G51700 Arabidopsis lyrata
Aqoxy3G00614 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3J3UL0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MEN3PN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VE7QKQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YDKP0V Arachis hypogaea
AT5G38720 Arabidopsis thaliana
ATR0691G244 Amborella trichopoda
Atru.chr11.1725 Acer truncatum
AUR62011452 Chenopodium quinoa
AUR62013504 Chenopodium quinoa
AUR62016605 Chenopodium quinoa
AUR62026768 Chenopodium quinoa
BcaB06g27239 Brassica carinata
BcaC02g09665 Brassica carinata
BcaC08g44401 Brassica carinata
BolC4t26116H Brassica oleracea
BolC6t37046H Brassica oleracea
BraA04t16828Z Brassica rapa
C04p45340 Brassica napus
C06p18340 Brassica napus
CAN.G497.25 Capsicum annuum
CANSAT21G0179 Cannabis sativa
CARHR291790 Cardamine hirsuta
Carub.0007s3714 Capsella rubella
Ca_13657_v3 Cicer arietinum L.
Ca_26327_v3 Cicer arietinum L.
CBR_g4867 Chara braunii
CBR_g52693 Chara braunii
Cc08_g12050 Coffea canephora
CDE01G0131 Ceratophyllum demersum
CDE02G0002 Ceratophyllum demersum
Ciclev10012260m.g Citrus clementina
CiPaw.03G007500 Carya illinoinensis
ClCG11G001130 Citrullus lanatus
COL.COLO4_37042 Corchorus olitorius
Cpa.g.sc70.15 Carica papaya
Cre01.g052200 Chlamydomonas reinhardtii
CsaV3_5G013180 Cucumis sativus L.
CSS0007706 Camellia sinensis var. sinensis
CSS0013880 Camellia sinensis var. sinensis
CSS0028445 Camellia sinensis var. sinensis
CSS0044288 Camellia sinensis var. sinensis
DCAR_026285 Daucus carota
Dinv33896 Davidia involucrata
Dinv34878 Davidia involucrata
Duzib211G0079 Durio zibethinus
ECA240G3626 Erigeron canadensis
EL10Ac7g16490 Beta vulgaris
Eucgr.I02096 Eucalyptus grandis
FAN02G2008 Fragaria x ananassa
FAN05G5180 Fragaria x ananassa
FAN09G0042 Fragaria x ananassa
FAN14G1445 Fragaria x ananassa
FvH4_6g45790 Fragaria vesca
Glyma.07G204700 Glycine max
Glyma.13G171200 Glycine max
Gohir.A13G118100 Gossypium hirsutum
Gohir.D13G121900 Gossypium hirsutum
Gorai.013G136600 Gossypium raimondii
GSVIVG01036491001 Vitis vinifera
HanXRQChr03g0078031 Helianthus annuus
Haze_14082 Corylus avellana
HPP92_015315 Vanilla planifolia
Hund27686 Selenicereus undatus
Hund27687 Selenicereus undatus
Lalb_Chr18g0059201 Lupinus albus
Lj6g0020881 Lotus japonicus
Lj7A7T32 Lonicera japonica
Lju237A1T66 Lonicera japonica
Lsat_1_v5_gn_8_24161 Lactuca sativa
Manes.01G106500 Manihot esculenta
Mapoly0058s0026 Marchantia polymorpha
MBI15_g18197_MAGBIO Magnolia biondii
MBI15_g38433_MAGBIO Magnolia biondii
MCO13G254 Micromonas commoda
MD09G1079700 Malus domestica
MD17G1070200 Malus domestica
Medtr1g090650 Medicago truncatula
Medtr4g051625 Medicago truncatula
Medtr8g085800 Medicago truncatula
Medtr8g085830 Medicago truncatula
MELO3C020033.2 Cucumis melo
Migut.K00872 Erythranthe guttata
MSTRG.15424 Avicennia marina
Nitab4.5_0001982g0030 Nicotiana tabacum
Nitab4.5_0006224g0050 Nicotiana tabacum
Nn1g09575 Nelumbo nucifera
Nn8g41096 Nelumbo nucifera
Oeu062202.1 Olea europaea
Oeu062205.1 Olea europaea
Os02g0728700 Oryza sativa ssp. japonica
Peaxi162Scf00479g00439 Petunia axillaris
Peaxi162Scf01056g00019 Petunia axillaris
PGR004G1892 Punica granatum
PGSC0003DMG400010100 Solanum tuberosum
PGSC0003DMG400018775 Solanum tuberosum
Phvul.001G061500 Phaseolus vulgaris
Phvul.008G006700 Phaseolus vulgaris
Potri.004G106900 Populus trichocarpa
Potri.017G108700 Populus trichocarpa
Pp3c10_24110 Physcomitrium patens
PRCOL_00005361 Prasinoderma coloniale
Prupe.3G244000 Prunus persica
Psat6g166480 Pisum sativum
PSO017G6426 Papaver somniferum
PSO478G0642 Papaver somniferum
QL02p054338 Quercus lobata
QL06p007211 Quercus lobata
RcHm_v2.0_Chr2g0163971 Rosa chinensis
Rhsim08G0081100 Rhododendron simsii
Sabra04G0075100 Salix brachista
SalBow1G7987 Salvia bowleyana
Sc10g0001500 Simmondsia chinensis
Sed0002827 Sechium edule
Sed0024356 Sechium edule
SEGI_21798 Sequoiadendron giganteum
SGA_v2.0_scaffold10G05141 Striga asiatica
SMO196G0176 Selaginella moellendorffii
SMO234G0023 Selaginella moellendorffii
Solyc02g089600.3 Solanum lycopersicum
Solyc03g046350.3 Solanum lycopersicum
Sopen02g034320 Solanum pennellii
Sopen03g009860 Solanum pennellii
Sp7g03200 Schrenkiella parvula
TAR371G0967 Trochodendron aralioides
TAR629G0318 Trochodendron aralioides
TAR629G0746 Trochodendron aralioides
THA.LOC104805544 Tarenaya hassleriana
Thecc.04G145900 Theobroma cacao
Thhalv10028147m.g Eutrema salsugineum
TPR.G28602 Trifolium pratense
TPR.G37714 Trifolium pratense
TWI32G0838 Tripterygium wilfordii
unitig_61.g26382 Utricularia gibba
vmacro18090 Vaccinium macrocarpon
VMungo1383G3720 Vigna mungo
Zm00001eb253420 Zea mays

User provided reference genes

Program Settings