Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p39420 Brassica napus
A03p37590 Brassica napus
A06p13990 Brassica napus
A10p02030 Brassica napus
Aa31LG3G6530 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_340.215 Anthoceros agrestis
Actinidia06220 Actinidia chinensis
Actinidia07967 Actinidia chinensis
Ah.01g018000 Amaranthus hybridus
AL3G23960 Arabidopsis lyrata
Aqoxy2G00437 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.CDA2TW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SBUN5C Arachis hypogaea
AT3G12300 Arabidopsis thaliana
ATR0307G112 Amborella trichopoda
Atru.chr12.1310 Acer truncatum
AUR62031741 Chenopodium quinoa
AUR62032626 Chenopodium quinoa
BcaB04g18685 Brassica carinata
BcaC01g04053 Brassica carinata
BcaC09g48229 Brassica carinata
BcaC09g48230 Brassica carinata
BolC1t05245H Brassica oleracea
BolC1t05246H Brassica oleracea
BolC3t16835H Brassica oleracea
BraA03t12913Z Brassica rapa
C01p53010 Brassica napus
C01p53030 Brassica napus
C03p45580 Brassica napus
CAN.G134.28 Capsicum annuum
CANSAT01G2494 Cannabis sativa
CARHR086850 Cardamine hirsuta
Carub.0003s1167 Capsella rubella
Ca_24007_v3 Cicer arietinum L.
Cc03_g14060 Coffea canephora
CDE08G0779 Ceratophyllum demersum
CDE08G1579 Ceratophyllum demersum
Cfa001149 Carpinus fangiana
Ciclev10002585m.g Citrus clementina
CiPaw.14G009400 Carya illinoinensis
ClCG05G014250 Citrullus lanatus
ClCG05G027020 Citrullus lanatus
COL.COLO4_32171 Corchorus olitorius
Cpa.g.sc82.9 Carica papaya
Cre07.g351650 Chlamydomonas reinhardtii
CsaV3_5G036940 Cucumis sativus L.
CSS0003702 Camellia sinensis var. sinensis
CSS0011052 Camellia sinensis var. sinensis
DCAR_006603 Daucus carota
Dinv11234 Davidia involucrata
Dinv32009 Davidia involucrata
Duzib068G0995 Durio zibethinus
Duzib084G0080 Durio zibethinus
ECA248G2538 Erigeron canadensis
EL10Ac2g02762 Beta vulgaris
Eucgr.E03953 Eucalyptus grandis
Eucgr.G03210 Eucalyptus grandis
FAN03G3221 Fragaria x ananassa
FAN06G1190 Fragaria x ananassa
FAN10G3328 Fragaria x ananassa
FvH4_7g03830 Fragaria vesca
Glyma.09G090300 Glycine max
Glyma.13G184700 Glycine max
Glyma.13G188051 Glycine max
Glyma.13G188400 Glycine max
Glyma.13G190100 Glycine max
Glyma.13G192001 Glycine max
Gohir.A03G073900 Gossypium hirsutum
Gohir.D03G100300 Gossypium hirsutum
Gorai.003G105400 Gossypium raimondii
GSVIVG01028667001 Vitis vinifera
GSVIVG01036607001 Vitis vinifera
HanXRQChr11g0341231 Helianthus annuus
Haze_02993 Corylus avellana
Haze_26638 Corylus avellana
Hma1.2p1_0837F.1_g226250 Hydrangea macrophylla
HPP92_011747 Vanilla planifolia
HPP92_011756 Vanilla planifolia
HPP92_011758 Vanilla planifolia
Hund13390 Selenicereus undatus
Lalb_Chr19g0132931 Lupinus albus
Lj3g0027433 Lotus japonicus
Lj9A658G62 Lonicera japonica
Lsat_1_v5_gn_1_117041 Lactuca sativa
Manes.04G156350 Manihot esculenta
Manes.11G007500 Manihot esculenta
Mapoly0109s0062 Marchantia polymorpha
MBI19_g37444_MAGBIO Magnolia biondii
MBI19_g44926_MAGBIO Magnolia biondii
MCO01G737 Micromonas commoda
MD02G1276800 Malus domestica
MD02G1276900 Malus domestica
MD07G1044300 Malus domestica
Medtr8g040630 Medicago truncatula
MELO3C034019.2 Cucumis melo
Migut.B01192 Erythranthe guttata
MSTRG.20500 Avicennia marina
Nitab4.5_0002838g0060 Nicotiana tabacum
Nitab4.5_0004168g0130 Nicotiana tabacum
Nn7g36825 Nelumbo nucifera
Oeu064146.2 Olea europaea
Os09g0510200 Oryza sativa ssp. japonica
Peaxi162Scf00220g00315 Petunia axillaris
PGR031G2406 Punica granatum
PGSC0003DMG401003286 Solanum tuberosum
Phvul.011G192750 Phaseolus vulgaris
Potri.003G193900 Populus trichocarpa
Pp3c16_8300 Physcomitrium patens
Pp3c25_460 Physcomitrium patens
Pp3c6_12450 Physcomitrium patens
Pp3c7_7130 Physcomitrium patens
PRCOL_00001494 Prasinoderma coloniale
Prupe.2G043300 Prunus persica
Prupe.3G123900 Prunus persica
Psat4g146480 Pisum sativum
PSO339G0131 Papaver somniferum
PSO384G0249 Papaver somniferum
QL04p021447 Quercus lobata
QL07p029267 Quercus lobata
RcHm_v2.0_Chr1g0327201 Rosa chinensis
Rhsim07G0069300 Rhododendron simsii
Sabra03G0144600 Salix brachista
Sc11g0006340 Simmondsia chinensis
Sed0013386 Sechium edule
Sed0026819 Sechium edule
SEGI_18977 Sequoiadendron giganteum
SGA_v2.0_scaffold408G51079 Striga asiatica
SHI34551 Sapria himalayana
SMO137G0211 Selaginella moellendorffii
SMO137G0355 Selaginella moellendorffii
SMO232G0039 Selaginella moellendorffii
SMO352G0037 Selaginella moellendorffii
Solyc01g096610.4 Solanum lycopersicum
Sopen01g040340 Solanum pennellii
Sp3g10520 Schrenkiella parvula
TAR633G2352 Trochodendron aralioides
THA.LOC104826749 Tarenaya hassleriana
Thecc.03G114300 Theobroma cacao
Thhalv10021577m.g Eutrema salsugineum
TPR.G8532 Trifolium pratense
TWI15G1146 Tripterygium wilfordii
unitig_22.g5330 Utricularia gibba
vmacro21942 Vaccinium macrocarpon
vmacro23458 Vaccinium macrocarpon
VMungo1127G1850 Vigna mungo
Zm00001eb317990 Zea mays

User provided reference genes

Program Settings