Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p18920 Brassica napus
A02p12960 Brassica napus
Aa31LG2G2190 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.727 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_369.165 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_369.410 Anthoceros agrestis
Actinidia08765 Actinidia chinensis
Actinidia24520 Actinidia chinensis
Actinidia34332 Actinidia chinensis
Ah.13g072370 Amaranthus hybridus
AL2G19600 Arabidopsis lyrata
Aqoxy1G03063 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.GG16T8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IZT0PT Arachis hypogaea
AT1G64990 Arabidopsis thaliana
AT4G27630 Arabidopsis thaliana
ATR0829G179 Amborella trichopoda
Atru.chr12.1876 Acer truncatum
AUR62002093 Chenopodium quinoa
AUR62028211 Chenopodium quinoa
BcaB05g24073 Brassica carinata
BcaB05g25317 Brassica carinata
BcaC03g14670 Brassica carinata
BcaC09g50566 Brassica carinata
BcaNung01651 Brassica carinata
BolC1t02332H Brassica oleracea
BolC2t08248H Brassica oleracea
BraA01t01833Z Brassica rapa
BraA02t06350Z Brassica rapa
C01p23870 Brassica napus
C02p21070 Brassica napus
CAN.G437.12 Capsicum annuum
CANSAT21G2526 Cannabis sativa
CARHR056390 Cardamine hirsuta
CARHR057320 Cardamine hirsuta
CARHR235330 Cardamine hirsuta
Carub.0002s1015 Capsella rubella
Carub.0007s1322 Capsella rubella
Carub.0008s0531 Capsella rubella
Carub.0008s0533 Capsella rubella
Ca_26497_v3 Cicer arietinum L.
CBR_g72647 Chara braunii
Cc02_g00100 Coffea canephora
Cc02_g00110 Coffea canephora
CDE11G0023 Ceratophyllum demersum
CDE11G0732 Ceratophyllum demersum
Cfa016075 Carpinus fangiana
Ciclev10031435m.g Citrus clementina
CiPaw.05G212800 Carya illinoinensis
ClCG09G017310 Citrullus lanatus
ClCG09G017320 Citrullus lanatus
COL.COLO4_15138 Corchorus olitorius
COL.COLO4_15139 Corchorus olitorius
Cpa.g.sc43.132 Carica papaya
Cpa.g.sc43.133 Carica papaya
Cpa.g.sc43.136 Carica papaya
Cre16.g674739 Chlamydomonas reinhardtii
CsaV3_2G014060 Cucumis sativus L.
CSS0008859 Camellia sinensis var. sinensis
CSS0015728 Camellia sinensis var. sinensis
CSS0027952 Camellia sinensis var. sinensis
CSS0031224 Camellia sinensis var. sinensis
CSS0032758 Camellia sinensis var. sinensis
DCAR_020429 Daucus carota
Dinv29126 Davidia involucrata
Duzib106G2059 Durio zibethinus
Duzib128G1855 Durio zibethinus
ECA232G0266 Erigeron canadensis
EL10Ac3g05043 Beta vulgaris
EL10Ac3g05835 Beta vulgaris
EL10Ac7g16242 Beta vulgaris
Eucgr.K00067 Eucalyptus grandis
FAN01G1789 Fragaria x ananassa
FAN03G0337 Fragaria x ananassa
FAN10G2688 Fragaria x ananassa
FvH4_7g34230 Fragaria vesca
Glyma.11G109900 Glycine max
Glyma.12G014800 Glycine max
Gohir.A02G125900 Gossypium hirsutum
Gohir.D03G054700 Gossypium hirsutum
Gorai.003G057600 Gossypium raimondii
GSVIVG01024328001 Vitis vinifera
HanXRQChr16g0512151 Helianthus annuus
Haze_00371 Corylus avellana
HPP92_014410 Vanilla planifolia
Hund09811 Selenicereus undatus
Lalb_Chr09g0320081 Lupinus albus
Lj3A884T54 Lonicera japonica
Lj3g0003232 Lotus japonicus
Lsat_1_v5_gn_9_47921 Lactuca sativa
Manes.08G160900 Manihot esculenta
Mapoly0094s0006 Marchantia polymorpha
MBI04_g12218_MAGBIO Magnolia biondii
MCO06G137 Micromonas commoda
MD01G1239000 Malus domestica
MD01G1239100 Malus domestica
MD01G1239200 Malus domestica
MD07G1310900 Malus domestica
Medtr5g005440 Medicago truncatula
MELO3C021899.2 Cucumis melo
Migut.C00159 Erythranthe guttata
MSTRG.24939 Avicennia marina
Nitab4.5_0006992g0040 Nicotiana tabacum
Nitab4.5_0009864g0010 Nicotiana tabacum
Nn1g02122 Nelumbo nucifera
Nn3g19238 Nelumbo nucifera
Oeu027894.4 Olea europaea
Oeu028985.2 Olea europaea
Os04g0600800 Oryza sativa ssp. japonica
Peaxi162Scf00802g00029 Petunia axillaris
PGR142G1194 Punica granatum
PGSC0003DMG401017405 Solanum tuberosum
PGSC0003DMG402017405 Solanum tuberosum
Phvul.011G017800 Phaseolus vulgaris
Potri.013G077700 Populus trichocarpa
Potri.019G042201 Populus trichocarpa
PRCOL_00000150 Prasinoderma coloniale
Prupe.2G329100 Prunus persica
Psat7g155320 Pisum sativum
PSO063G4466 Papaver somniferum
PSO782G0889 Papaver somniferum
QL09p020758 Quercus lobata
RcHm_v2.0_Chr1g0384591 Rosa chinensis
Rhsim03G0224300 Rhododendron simsii
Sabra13G0066500 Salix brachista
SalBow7G2894 Salvia bowleyana
Sc13g0011000 Simmondsia chinensis
Sed0001134 Sechium edule
SEGI_05893 Sequoiadendron giganteum
SEGI_13634 Sequoiadendron giganteum
SEGI_29432 Sequoiadendron giganteum
SGA_v2.0_scaffold188G40301 Striga asiatica
SMO304G0068 Selaginella moellendorffii
Solyc07g045270.2 Solanum lycopersicum
Solyc07g045330.3 Solanum lycopersicum
Sopen07g023860 Solanum pennellii
Sp5g19320 Schrenkiella parvula
Sp7g25580 Schrenkiella parvula
TAR629G1612 Trochodendron aralioides
THA.LOC104805716 Tarenaya hassleriana
Thecc.05G222600 Theobroma cacao
Thhalv10025115m.g Eutrema salsugineum
TWI79G0887 Tripterygium wilfordii
unitig_0.g2070 Utricularia gibba
vmacro06372 Vaccinium macrocarpon
VMungo1127G0275 Vigna mungo
Zm00001eb430290 Zea mays

User provided reference genes

Program Settings