Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p07120 Brassica napus
A08p18900 Brassica napus
Aa31LG2G19270 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2173 Anthoceros agrestis
Ah.11g047790 Amaranthus hybridus
AL1G53870 Arabidopsis lyrata
AL7G21020 Arabidopsis lyrata
Aqoxy6G00960 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.A6BGRK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JWFJ3V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LC5CIX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PMC9AK Arachis hypogaea
AT1G47578 Arabidopsis thaliana
AT4G31050 Arabidopsis thaliana
ATR0733G118 Amborella trichopoda
Atru.chr13.576 Acer truncatum
AUR62008526 Chenopodium quinoa
AUR62021564 Chenopodium quinoa
AUR62023962 Chenopodium quinoa
AUR62031756 Chenopodium quinoa
BcaB03g12674 Brassica carinata
BcaC01g01116 Brassica carinata
BcaC09g51892 Brassica carinata
BcaNung03418 Brassica carinata
BolC1t00775H Brassica oleracea
BolC3t21140H Brassica oleracea
BraA01t00664Z Brassica rapa
C01p07880 Brassica napus
C03p88310 Brassica napus
CAN.G371.115 Capsicum annuum
CANSAT56G2411 Cannabis sativa
CARHR037210 Cardamine hirsuta
CARHR238960 Cardamine hirsuta
Carub.0001s3634 Capsella rubella
Carub.0007s0947 Capsella rubella
Ca_15531_v3 Cicer arietinum L.
CBR_g38019 Chara braunii
Cc07_g16250 Coffea canephora
CDE09G0871 Ceratophyllum demersum
Cfa020647 Carpinus fangiana
Ciclev10002047m.g Citrus clementina
CiPaw.06G110100 Carya illinoinensis
CiPaw.16G052500 Carya illinoinensis
ClCG05G022050 Citrullus lanatus
COL.COLO4_26393 Corchorus olitorius
Cpa.g.sc64.28 Carica papaya
Cre16.g675250 Chlamydomonas reinhardtii
CsaV3_5G035090 Cucumis sativus L.
CSS0037792 Camellia sinensis var. sinensis
CSS0045600 Camellia sinensis var. sinensis
DCAR_019427 Daucus carota
DCAR_019493 Daucus carota
Dinv29831 Davidia involucrata
Dinv29837 Davidia involucrata
Duzib041G0147 Durio zibethinus
ECA232G3633 Erigeron canadensis
EL10Ac5g11128 Beta vulgaris
Eucgr.H02545 Eucalyptus grandis
FAN15G1231 Fragaria x ananassa
FAN20G2779 Fragaria x ananassa
FAN24G0239 Fragaria x ananassa
FAN27G1995 Fragaria x ananassa
FvH4_2g26090 Fragaria vesca
Glyma.04G034800 Glycine max
Glyma.08G314300 Glycine max
Glyma.18G099900 Glycine max
Gohir.A05G197900 Gossypium hirsutum
Gohir.D05G200800 Gossypium hirsutum
Gorai.009G206100 Gossypium raimondii
GSVIVG01011051001 Vitis vinifera
HanXRQChr05g0141551 Helianthus annuus
HanXRQChr09g0268371 Helianthus annuus
Haze_17608 Corylus avellana
Hma1.2p1_0260F.1_g104390 Hydrangea macrophylla
HPP92_020226 Vanilla planifolia
Hund09910 Selenicereus undatus
Lalb_Chr02g0157531 Lupinus albus
Lj1A1064T34 Lonicera japonica
Lj1g0004451 Lotus japonicus
Lj4g0000942 Lotus japonicus
Lsat_1_v5_gn_4_122901 Lactuca sativa
Manes.05G166100 Manihot esculenta
Mapoly0078s0004 Marchantia polymorpha
MBI16_g31342_MAGBIO Magnolia biondii
MBI16_g45778_MAGBIO Magnolia biondii
MCO07G632 Micromonas commoda
MD06G1010800 Malus domestica
Medtr3g111580 Medicago truncatula
MELO3C012322.2 Cucumis melo
Migut.N02680 Erythranthe guttata
MSTRG.24312 Avicennia marina
Nitab4.5_0000110g0070 Nicotiana tabacum
Nitab4.5_0009288g0040 Nicotiana tabacum
Nn7g38029 Nelumbo nucifera
Oeu015608.1 Olea europaea
Oeu019097.1 Olea europaea
Os12g0596000 Oryza sativa ssp. japonica
Peaxi162Scf00280g00077 Petunia axillaris
PGR031G0661 Punica granatum
PGSC0003DMG400016886 Solanum tuberosum
Phvul.005G120000 Phaseolus vulgaris
Phvul.006G040300 Phaseolus vulgaris
Potri.002G131000 Populus trichocarpa
Pp3c12_18570 Physcomitrium patens
PRCOL_00000083 Prasinoderma coloniale
Prupe.5G012900 Prunus persica
Psat0s2724g0080 Pisum sativum
Psat5g144200 Pisum sativum
PSO170G5894 Papaver somniferum
PSO170G6637 Papaver somniferum
PSO700G0184 Papaver somniferum
QL02p010939 Quercus lobata
QL04p005174 Quercus lobata
QL04p005176 Quercus lobata
RcHm_v2.0_Chr5g0074221 Rosa chinensis
RcHm_v2.0_Chr6g0294461 Rosa chinensis
Rhsim06G0039300 Rhododendron simsii
Rhsim08G0075100 Rhododendron simsii
Sabra02G0103000 Salix brachista
SalBow7G0739 Salvia bowleyana
Sc02g0006690 Simmondsia chinensis
Sed0016228 Sechium edule
SEGI_06323 Sequoiadendron giganteum
SGA_v2.0_scaffold14G07044 Striga asiatica
SHI04962 Sapria himalayana
SMO118G0246 Selaginella moellendorffii
Solyc04g079750.4 Solanum lycopersicum
Sopen04g033330 Solanum pennellii
Sp1g34610 Schrenkiella parvula
Sp7g28930 Schrenkiella parvula
TAR376G0282 Trochodendron aralioides
TAR628G0023 Trochodendron aralioides
TAR628G1629 Trochodendron aralioides
TAR629G0042 Trochodendron aralioides
TAR636G2535 Trochodendron aralioides
THA.LOC104803396 Tarenaya hassleriana
Thecc.08G019900 Theobroma cacao
Thhalv10025943m.g Eutrema salsugineum
TPR.G10101 Trifolium pratense
TPR.G12442 Trifolium pratense
TPR.G21549 Trifolium pratense
TWI56G0576 Tripterygium wilfordii
vmacro12719 Vaccinium macrocarpon
vmacro21593 Vaccinium macrocarpon
vmacro21595 Vaccinium macrocarpon
VMungo0540G1795 Vigna mungo
Zm00001eb030760 Zea mays

User provided reference genes

Program Settings