Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p28480 Brassica napus
A05p08610 Brassica napus
Aa31LG5G22620 Aethionema arabicum
Actinidia19731 Actinidia chinensis
Ah.15g091990 Amaranthus hybridus
AL4G33680 Arabidopsis lyrata
Aqoxy4G03126 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4HMS3J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C8BSPY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P2DQEA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X85SHR Arachis hypogaea
AT2G37300 Arabidopsis thaliana
ATR0594G102 Amborella trichopoda
Atru.chr8.2512 Acer truncatum
Atru.chr8.2513 Acer truncatum
BcaB01g03781 Brassica carinata
BcaB02g09290 Brassica carinata
BcaC02g07519 Brassica carinata
BcaC02g11850 Brassica carinata
BcaNung06611 Brassica carinata
BcaNung06612 Brassica carinata
BolC3t14814H Brassica oleracea
BolC4t22663H Brassica oleracea
BolC4t28082H Brassica oleracea
BraA04t18326Z Brassica rapa
C04p10700 Brassica napus
C04p65800 Brassica napus
CAN.G608.34 Capsicum annuum
CAN.G867.2 Capsicum annuum
CAN.G867.6 Capsicum annuum
CANSAT80G1895 Cannabis sativa
CARHR132290 Cardamine hirsuta
Carub.0004s1921 Capsella rubella
Ca_11442_v3 Cicer arietinum L.
Cc06_g03330 Coffea canephora
Ciclev10012401m.g Citrus clementina
CiPaw.09G185000 Carya illinoinensis
CiPaw.10G138900 Carya illinoinensis
ClCG04G008700 Citrullus lanatus
ClCG10G020720 Citrullus lanatus
COL.COLO4_10304 Corchorus olitorius
Cpa.g.sc114.29 Carica papaya
CsaV3_3G035290 Cucumis sativus L.
CsaV3_4G024460 Cucumis sativus L.
CSS0000366 Camellia sinensis var. sinensis
CSS0008181 Camellia sinensis var. sinensis
CSS0037973 Camellia sinensis var. sinensis
DCAR_017742 Daucus carota
Dinv35683 Davidia involucrata
Dinv37236 Davidia involucrata
ECA238G2925 Erigeron canadensis
EL10Ac7g17266 Beta vulgaris
Eucgr.A01206 Eucalyptus grandis
Eucgr.K03187 Eucalyptus grandis
FAN02G2240 Fragaria x ananassa
FAN05G3543 Fragaria x ananassa
FAN09G0990 Fragaria x ananassa
FAN14G1622 Fragaria x ananassa
FvH4_6g14910 Fragaria vesca
Glyma.03G176000 Glycine max
Glyma.10G047400 Glycine max
Glyma.13G135200 Glycine max
Glyma.19G176500 Glycine max
Gohir.A04G077600 Gossypium hirsutum
Gohir.A09G160200 Gossypium hirsutum
Gohir.D04G116800 Gossypium hirsutum
Gohir.D09G155800 Gossypium hirsutum
Gorai.006G177300 Gossypium raimondii
Gorai.009G173500 Gossypium raimondii
Gorai.009G421700 Gossypium raimondii
HanXRQChr07g0195961 Helianthus annuus
HanXRQChr14g0453421 Helianthus annuus
Haze_20682 Corylus avellana
Hma1.2p1_0111F.1_g053560 Hydrangea macrophylla
HPP92_001696 Vanilla planifolia
Hund12070 Selenicereus undatus
Lalb_Chr02g0153461 Lupinus albus
Lalb_Chr06g0171201 Lupinus albus
Lj2A104T80 Lonicera japonica
Lj3A975T70 Lonicera japonica
Lj5g0023317 Lotus japonicus
Lsat_1_v5_gn_2_110141 Lactuca sativa
Manes.08G000800 Manihot esculenta
Manes.09G071500 Manihot esculenta
MBI05_g16176_MAGBIO Magnolia biondii
MD04G1111000 Malus domestica
MD12G1129800 Malus domestica
Medtr1g067220 Medicago truncatula
MELO3C003079.2 Cucumis melo
MELO3C009296.2 Cucumis melo
Migut.J00395 Erythranthe guttata
Migut.L01647 Erythranthe guttata
MSTRG.10290 Avicennia marina
MSTRG.19121 Avicennia marina
MSTRG.19123 Avicennia marina
MSTRG.26739 Avicennia marina
Nitab4.5_0000202g0430 Nicotiana tabacum
Nitab4.5_0000643g0210 Nicotiana tabacum
Nitab4.5_0007045g0010 Nicotiana tabacum
Nitab4.5_0016310g0010 Nicotiana tabacum
Nn2g10587 Nelumbo nucifera
Nn2g12943 Nelumbo nucifera
Oeu029113.1 Olea europaea
Oeu060067.1 Olea europaea
Os03g0283400 Oryza sativa ssp. japonica
Peaxi162Scf00472g00079 Petunia axillaris
Peaxi162Scf00597g00824 Petunia axillaris
PGR004G0295 Punica granatum
PGR004G2597 Punica granatum
PGSC0003DMG400002023 Solanum tuberosum
PGSC0003DMG400011051 Solanum tuberosum
PGSC0003DMG400018718 Solanum tuberosum
Phvul.007G161600 Phaseolus vulgaris
Potri.006G216300 Populus trichocarpa
Potri.016G082700 Populus trichocarpa
Psat6g069760 Pisum sativum
Psat6g220800 Pisum sativum
PSO384G3176 Papaver somniferum
QL07p045858 Quercus lobata
RcHm_v2.0_Chr3g0468111 Rosa chinensis
RhsimUnG0120800 Rhododendron simsii
RhsimUnG0120900 Rhododendron simsii
Sabra06G0166700 Salix brachista
SalBow4G1465 Salvia bowleyana
Sc01g0003720 Simmondsia chinensis
Sed0020255 Sechium edule
Sed0023997 Sechium edule
Sed0025194 Sechium edule
SGA_v2.0_scaffold35G14182 Striga asiatica
Solyc10g084420.2 Solanum lycopersicum
Sopen10g033860 Solanum pennellii
Sp4g19620 Schrenkiella parvula
TAR623G0749 Trochodendron aralioides
THA.LOC104805339 Tarenaya hassleriana
THA.LOC104823441 Tarenaya hassleriana
Thecc.05G050500 Theobroma cacao
Thhalv10017275m.g Eutrema salsugineum
TPR.G35656 Trifolium pratense
TWI53G0396 Tripterygium wilfordii
unitig_22.g6090 Utricularia gibba
unitig_32.g11461 Utricularia gibba
unitig_60.g25816 Utricularia gibba
vmacro20083 Vaccinium macrocarpon
VMungo0720G0246 Vigna mungo
VMungo1383G2298 Vigna mungo
Zm00001eb012960 Zea mays
Zm00001eb397270 Zea mays

User provided reference genes

Program Settings