Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p32220 Brassica napus
Aa31LG1G21380 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.4009 Anthoceros agrestis
Actinidia14741 Actinidia chinensis
Actinidia18162 Actinidia chinensis
Ah.15g090870 Amaranthus hybridus
AL6G13480 Arabidopsis lyrata
Aqoxy2G01189 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0JB8QE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IX7NGG Arachis hypogaea
AT5G03900 Arabidopsis thaliana
ATR0776G070 Amborella trichopoda
Atru.chr8.1534 Acer truncatum
AUR62006183 Chenopodium quinoa
AUR62028518 Chenopodium quinoa
BcaB05g21796 Brassica carinata
BcaC03g12977 Brassica carinata
BcaC06g32093 Brassica carinata
BolC2t06125H Brassica oleracea
BolC9t60037H Brassica oleracea
BraA02t04791Z Brassica rapa
BraA10t45265Z Brassica rapa
C02p01600 Brassica napus
C09p73020 Brassica napus
CAN.G1407.2 Capsicum annuum
CANSAT80G0330 Cannabis sativa
CARHR209360 Cardamine hirsuta
Carub.0006s0285 Capsella rubella
Ca_19610_v3 Cicer arietinum L.
CBR_g12587 Chara braunii
Cc00_g34730 Coffea canephora
Cc06_g05780 Coffea canephora
CDE06G1324 Ceratophyllum demersum
CDE08G0731 Ceratophyllum demersum
Cfa016609 Carpinus fangiana
Ciclev10013333m.g Citrus clementina
CiPaw.09G014200 Carya illinoinensis
ClCG10G018960 Citrullus lanatus
COL.COLO4_29732 Corchorus olitorius
Cpa.g.sc5.17 Carica papaya
Cpa.g.sc5.18 Carica papaya
Cre07.g338350 Chlamydomonas reinhardtii
CsaV3_3G037290 Cucumis sativus L.
CSS0000051 Camellia sinensis var. sinensis
DCAR_007754 Daucus carota
DCAR_013386 Daucus carota
DCAR_013387 Daucus carota
DCAR_020746 Daucus carota
Dinv31688 Davidia involucrata
Duzib093G1424 Durio zibethinus
EL10Ac7g16915 Beta vulgaris
Eucgr.K02037 Eucalyptus grandis
FAN02G1609 Fragaria x ananassa
FAN02G3405 Fragaria x ananassa
FAN05G2644 Fragaria x ananassa
FAN05G3313 Fragaria x ananassa
FAN05G4146 Fragaria x ananassa
FAN09G1572 Fragaria x ananassa
FAN14G0184 Fragaria x ananassa
FAN14G0820 Fragaria x ananassa
FAN14G5862 Fragaria x ananassa
FvH4_6g18720 Fragaria vesca
FvH4_6g18750 Fragaria vesca
FvH4_6g18760 Fragaria vesca
FvH4_6g48690 Fragaria vesca
Glyma.01G077300 Glycine max
Glyma.11G176309 Glycine max
Gohir.A04G062800 Gossypium hirsutum
Gohir.D04G099900 Gossypium hirsutum
Gorai.009G402800 Gossypium raimondii
GSVIVG01033846001 Vitis vinifera
HanXRQChr01g0001931 Helianthus annuus
HanXRQChr01g0001941 Helianthus annuus
HanXRQChr05g0163581 Helianthus annuus
Haze_19613 Corylus avellana
Hma1.2p1_0084F.1_g043830 Hydrangea macrophylla
Hma1.2p1_0820F.1_g223840 Hydrangea macrophylla
HPP92_005468 Vanilla planifolia
Hund19931 Selenicereus undatus
Lalb_Chr07g0194001 Lupinus albus
Lj1g0011596 Lotus japonicus
Lj2A1003T9 Lonicera japonica
Lj2A137T30 Lonicera japonica
Lsat_1_v5_gn_5_164821 Lactuca sativa
Manes.08G025400 Manihot esculenta
Mapoly0014s0147 Marchantia polymorpha
MCO08G276 Micromonas commoda
MD12G1036400 Malus domestica
MD14G1023200 Malus domestica
Medtr7g030010 Medicago truncatula
Medtr7g038740 Medicago truncatula
MELO3C009474.2 Cucumis melo
Migut.J01039 Erythranthe guttata
Migut.J01040 Erythranthe guttata
Nitab4.5_0000071g0150 Nicotiana tabacum
Nitab4.5_0004212g0030 Nicotiana tabacum
Nitab4.5_0008893g0010 Nicotiana tabacum
Nn6g34895 Nelumbo nucifera
Os02g0533000 Oryza sativa ssp. japonica
Peaxi162Scf00858g00312 Petunia axillaris
Peaxi162Scf01227g00030 Petunia axillaris
PGR142G4281 Punica granatum
PGSC0003DMG400019058 Solanum tuberosum
Phvul.008G154100 Phaseolus vulgaris
Potri.004G090400 Populus trichocarpa
Pp3c24_800 Physcomitrium patens
PRCOL_00000272 Prasinoderma coloniale
Prupe.7G109900 Prunus persica
Psat3g173280 Pisum sativum
Psat3g173320 Pisum sativum
PSO339G4989 Papaver somniferum
PSO384G3764 Papaver somniferum
QL07p038742 Quercus lobata
QL07p038993 Quercus lobata
RcHm_v2.0_Chr2g0168601 Rosa chinensis
RcHm_v2.0_Chr3g0473691 Rosa chinensis
RcHm_v2.0_Chr3g0473711 Rosa chinensis
RcHm_v2.0_Chr3g0473721 Rosa chinensis
RcHm_v2.0_Chr3g0473731 Rosa chinensis
RcHm_v2.0_Chr3g0473761 Rosa chinensis
RcHm_v2.0_Chr6g0257921 Rosa chinensis
Rhsim07G0139000 Rhododendron simsii
Sabra04G0060700 Salix brachista
SalBow3G3032 Salvia bowleyana
Sc02g0000260 Simmondsia chinensis
Sed0020948 Sechium edule
SEGI_03177 Sequoiadendron giganteum
SEGI_11477 Sequoiadendron giganteum
SEGI_29241 Sequoiadendron giganteum
SEGI_36218 Sequoiadendron giganteum
SEGI_39840 Sequoiadendron giganteum
SGA_v2.0_scaffold13G06716 Striga asiatica
SHI23815 Sapria himalayana
SMO137G0276 Selaginella moellendorffii
Solyc04g049130.4 Solanum lycopersicum
Sopen04g018570 Solanum pennellii
Sp6g38830 Schrenkiella parvula
TAR633G1381 Trochodendron aralioides
THA.LOC104823220 Tarenaya hassleriana
Thecc.05G089300 Theobroma cacao
Thhalv10013253m.g Eutrema salsugineum
TPR.G39122 Trifolium pratense
TWI77G1027 Tripterygium wilfordii
unitig_578.g16025 Utricularia gibba
vmacro14235 Vaccinium macrocarpon
VMungo1383G3240 Vigna mungo
Zm00001eb242770 Zea mays

User provided reference genes

Program Settings