Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p30450 Brassica napus
Aa31LG8G5990 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_369.474 Anthoceros agrestis
Actinidia00446 Actinidia chinensis
Actinidia00447 Actinidia chinensis
Actinidia12956 Actinidia chinensis
Actinidia12957 Actinidia chinensis
Ah.02g117120 Amaranthus hybridus
AL3G32570 Arabidopsis lyrata
Aqoxy5G01253 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4LZP30 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q5Y61J Arachis hypogaea
AT3G19190 Arabidopsis thaliana
ATR0100G063 Amborella trichopoda
Atru.chr5.2729 Acer truncatum
Atru.chr5.2730 Acer truncatum
AUR62011444 Chenopodium quinoa
AUR62016617 Chenopodium quinoa
AUR62016618 Chenopodium quinoa
BcaB06g25975 Brassica carinata
BcaNung06609 Brassica carinata
BcaNung06981 Brassica carinata
BolC5t33332H Brassica oleracea
BraA05t21884Z Brassica rapa
C05p46050 Brassica napus
CAN.G1041.23 Capsicum annuum
CARHR094600 Cardamine hirsuta
Carub.0003s1902 Capsella rubella
Ca_18676_v3 Cicer arietinum L.
Cc02_g18700 Coffea canephora
CDE02G1280 Ceratophyllum demersum
CDE09G1277 Ceratophyllum demersum
CDE09G1352 Ceratophyllum demersum
Ciclev10027665m.g Citrus clementina
CiPaw.05G051900 Carya illinoinensis
CiPaw.06G143300 Carya illinoinensis
ClCG05G010030 Citrullus lanatus
COL.COLO4_32667 Corchorus olitorius
Cpa.g.sc62.21 Carica papaya
Cre09.g408950 Chlamydomonas reinhardtii
CsaV3_3G018530 Cucumis sativus L.
CsaV3_3G018540 Cucumis sativus L.
CSS0011349 Camellia sinensis var. sinensis
DCAR_022030 Daucus carota
Dinv23614 Davidia involucrata
Dinv23615 Davidia involucrata
Dinv23622 Davidia involucrata
Dinv23623 Davidia involucrata
Dinv42150 Davidia involucrata
Duzib052G1101 Durio zibethinus
Duzib248G0232 Durio zibethinus
ECA240G0709 Erigeron canadensis
EL10Ac9g21835 Beta vulgaris
Eucgr.I01159 Eucalyptus grandis
Eucgr.I01407 Eucalyptus grandis
FAN15G2385 Fragaria x ananassa
FAN20G2783 Fragaria x ananassa
FAN24G2004 Fragaria x ananassa
FAN27G2299 Fragaria x ananassa
FvH4_2g06211 Fragaria vesca
FvH4_2g06220 Fragaria vesca
Glyma.02G133400 Glycine max
Glyma.07G211600 Glycine max
Gohir.A03G189900 Gossypium hirsutum
Gohir.D02G210500 Gossypium hirsutum
Gorai.005G238500 Gossypium raimondii
GSVIVG01031759001 Vitis vinifera
HanXRQChr03g0072341 Helianthus annuus
Haze_01830 Corylus avellana
Hma1.2p1_0027F.1_g017200 Hydrangea macrophylla
Hma1.2p1_0028F.1_g017490 Hydrangea macrophylla
HPP92_028321 Vanilla planifolia
HPP92_028322 Vanilla planifolia
Hund00331 Selenicereus undatus
Lalb_Chr09g0328271 Lupinus albus
Lj4g0027932 Lotus japonicus
Lj9C358T17 Lonicera japonica
Lsat_1_v5_gn_8_84520 Lactuca sativa
Lsat_1_v5_gn_9_110121 Lactuca sativa
Manes.10G065500 Manihot esculenta
Mapoly0038s0067 Marchantia polymorpha
MBI02_g17325_MAGBIO Magnolia biondii
MBI11_g39905_MAGBIO Magnolia biondii
MBI18_g07589_MAGBIO Magnolia biondii
MCO03G368 Micromonas commoda
MD05G1079500 Malus domestica
MD10G1093800 Malus domestica
Medtr4g086370 Medicago truncatula
MELO3C019513.2 Cucumis melo
Migut.B00336 Erythranthe guttata
Migut.B00337 Erythranthe guttata
Migut.B00338 Erythranthe guttata
Migut.B00339 Erythranthe guttata
Nitab4.5_0003080g0090 Nicotiana tabacum
Nitab4.5_0003503g0010 Nicotiana tabacum
Nn5g30243 Nelumbo nucifera
Oeu003689.1 Olea europaea
Oeu025571.1 Olea europaea
Oeu025573.1 Olea europaea
Os06g0267600 Oryza sativa ssp. japonica
Peaxi162Scf00016g01825 Petunia axillaris
PGSC0003DMG400025793 Solanum tuberosum
Phvul.003G295800 Phaseolus vulgaris
Potri.004G141700 Populus trichocarpa
Potri.009G102900 Populus trichocarpa
Pp3c13_15610 Physcomitrium patens
PRCOL_00003309 Prasinoderma coloniale
Prupe.8G123400 Prunus persica
Psat5g162320 Pisum sativum
Psat6g196240 Pisum sativum
Psat7g124160 Pisum sativum
PSO170G0229 Papaver somniferum
PSO210G3961 Papaver somniferum
QL11p036050 Quercus lobata
RcHm_v2.0_Chr6g0256971 Rosa chinensis
Rhsim11G0166400 Rhododendron simsii
Rhsim11G0175200 Rhododendron simsii
Rhsim11G0188700 Rhododendron simsii
Sabra04G0093700 Salix brachista
Sabra09G0078800 Salix brachista
Sc14g0001650 Simmondsia chinensis
Sed0007905 Sechium edule
SEGI_28745 Sequoiadendron giganteum
SGA_v2.0_scaffold90G27665 Striga asiatica
SHI05371 Sapria himalayana
SHI05372 Sapria himalayana
SHI05373 Sapria himalayana
SHI05374 Sapria himalayana
SMO196G0062 Selaginella moellendorffii
Solyc01g108160.3 Solanum lycopersicum
Sopen01g050390 Solanum pennellii
Sp3g17260 Schrenkiella parvula
TAR376G0189 Trochodendron aralioides
TAR628G0752 Trochodendron aralioides
THA.LOC104800351 Tarenaya hassleriana
Thecc.02G099500 Theobroma cacao
Thhalv10019879m.g Eutrema salsugineum
TPR.G30829 Trifolium pratense
TPR.G30833 Trifolium pratense
TPR.G30995 Trifolium pratense
TWI75G0165 Tripterygium wilfordii
TWI79G0096 Tripterygium wilfordii
unitig_21.g20750 Utricularia gibba
vmacro02202 Vaccinium macrocarpon
VMungo0251G1021 Vigna mungo
Zm00001eb280540 Zea mays
Zm00001eb380180 Zea mays

User provided reference genes

Program Settings