Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p20820 Brassica napus
A03p50110 Brassica napus
Aa31LG2G12850 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2435 Anthoceros agrestis
Actinidia12518 Actinidia chinensis
Actinidia20180 Actinidia chinensis
Actinidia31600 Actinidia chinensis
Ah.02g112550 Amaranthus hybridus
Ah.11g049140 Amaranthus hybridus
AL7G38090 Arabidopsis lyrata
Aqoxy1G01454 Aquilegia oxysepala
Aqoxy7G02953 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.AD0Y88 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q3EEPT Arachis hypogaea
AT4G16660 Arabidopsis thaliana
ATR0165G012 Amborella trichopoda
Atru.chr8.953 Acer truncatum
AUR62011754 Chenopodium quinoa
AUR62024598 Chenopodium quinoa
BcaC06g33504 Brassica carinata
BcaC09g50395 Brassica carinata
BcaNung00164 Brassica carinata
BcaNung02855 Brassica carinata
BolC1t02543H Brassica oleracea
BolC7t45338H Brassica oleracea
BraA01t01991Z Brassica rapa
BraA03t14104Z Brassica rapa
C01p25980 Brassica napus
C07p48150 Brassica napus
CAN.G819.6 Capsicum annuum
CANSAT64G0637 Cannabis sativa
CARHR223160 Cardamine hirsuta
Carub.0007s2474 Capsella rubella
Ca_16307_v3 Cicer arietinum L.
CBR_g51500 Chara braunii
Cc05_g00190 Coffea canephora
CDE04G3723 Ceratophyllum demersum
CDE12G0959 Ceratophyllum demersum
Cfa014184 Carpinus fangiana
Ciclev10011017m.g Citrus clementina
CiPaw.08G183200 Carya illinoinensis
ClCG11G016750 Citrullus lanatus
COL.COLO4_07158 Corchorus olitorius
Cpa.g.sc29.171 Carica papaya
Cre10.g439900 Chlamydomonas reinhardtii
CsaV3_4G032260 Cucumis sativus L.
CSS0015117 Camellia sinensis var. sinensis
DCAR_009834 Daucus carota
DCAR_009836 Daucus carota
DCAR_013333 Daucus carota
Dinv17737 Davidia involucrata
Duzib106G1641 Durio zibethinus
Duzib114G0005 Durio zibethinus
ECA246G4505 Erigeron canadensis
EL10As5g23603 Beta vulgaris
Eucgr.C01277 Eucalyptus grandis
FAN02G1751 Fragaria x ananassa
FAN05G3788 Fragaria x ananassa
FAN09G3136 Fragaria x ananassa
FAN14G1066 Fragaria x ananassa
FAN14G5920 Fragaria x ananassa
FvH4_6g39720 Fragaria vesca
Glyma.13G003700 Glycine max
Glyma.20G065900 Glycine max
Gohir.A06G171800 Gossypium hirsutum
Gohir.A10G192200 Gossypium hirsutum
Gohir.D06G180600 Gossypium hirsutum
Gohir.D10G200000 Gossypium hirsutum
Gorai.010G212100 Gossypium raimondii
Gorai.011G224200 Gossypium raimondii
GSVIVG01026352001 Vitis vinifera
GSVIVG01035736001 Vitis vinifera
GSVIVG01038380001 Vitis vinifera
HanXRQChr06g0170921 Helianthus annuus
HanXRQChr15g0473981 Helianthus annuus
HanXRQChr17g0541391 Helianthus annuus
Haze_12559 Corylus avellana
Haze_25506 Corylus avellana
HPP92_000271 Vanilla planifolia
HPP92_000272 Vanilla planifolia
Hund09663 Selenicereus undatus
Lalb_Chr22g0360831 Lupinus albus
Lalb_Chr24g0402841 Lupinus albus
Lj1A1038T61 Lonicera japonica
Lj6g0023196 Lotus japonicus
Lsat_1_v5_gn_3_36561 Lactuca sativa
Manes.09G073400 Manihot esculenta
Mapoly0003s0020 Marchantia polymorpha
MBI18_g19855_MAGBIO Magnolia biondii
MCO04G028 Micromonas commoda
MD09G1137300 Malus domestica
MD17G1127600 Malus domestica
Medtr3g081170 Medicago truncatula
MELO3C026399.2 Cucumis melo
Migut.H01267 Erythranthe guttata
MSTRG.14110 Avicennia marina
Nitab4.5_0001843g0090 Nicotiana tabacum
Nitab4.5_0008439g0040 Nicotiana tabacum
Nn4g26583 Nelumbo nucifera
Oeu022922.1 Olea europaea
Oeu056834.1 Olea europaea
Oeu056840.1 Olea europaea
Oeu056842.1 Olea europaea
Os02g0710900 Oryza sativa ssp. japonica
Peaxi162Scf00833g00534 Petunia axillaris
Peaxi162Scf00833g00535 Petunia axillaris
PGR042G1516 Punica granatum
PGR044G0700 Punica granatum
PGSC0003DMG400015920 Solanum tuberosum
Phvul.006G001600 Phaseolus vulgaris
Potri.006G022100 Populus trichocarpa
Potri.016G019800 Populus trichocarpa
Pp3c14_19430 Physcomitrium patens
PRCOL_00001664 Prasinoderma coloniale
Prupe.3G187600 Prunus persica
Psat5g108200 Pisum sativum
PSO017G0501 Papaver somniferum
PSO170G1841 Papaver somniferum
QL04p065237 Quercus lobata
RcHm_v2.0_Chr2g0153811 Rosa chinensis
Rhsim12G0014100 Rhododendron simsii
Sabra06G0016000 Salix brachista
Sabra16G0021700 Salix brachista
Sabra16G0026400 Salix brachista
Sc17g0000220 Simmondsia chinensis
Sed0003548 Sechium edule
Sed0011024 Sechium edule
SEGI_12005 Sequoiadendron giganteum
SGA_v2.0_scaffold159G37541 Striga asiatica
SMO141G0294 Selaginella moellendorffii
Solyc07g043560.4 Solanum lycopersicum
Sopen07g023120 Solanum pennellii
Sp7g15270 Schrenkiella parvula
TAR626G1573 Trochodendron aralioides
THA.LOC104814475 Tarenaya hassleriana
THA.LOC104815497 Tarenaya hassleriana
Thecc.10G130900 Theobroma cacao
Thhalv10024376m.g Eutrema salsugineum
TPR.G33600 Trifolium pratense
TWI32G0255 Tripterygium wilfordii
TWI60G1018 Tripterygium wilfordii
unitig_26.g9919 Utricularia gibba
vmacro08751 Vaccinium macrocarpon
VMungo1383G2414 Vigna mungo
Zm00001eb188700 Zea mays
Zm00001eb188750 Zea mays
Zm00001eb252410 Zea mays

User provided reference genes

Program Settings